Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 SAR1AP2-201ENST00000392696 594 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 MTATP6P31-201ENST00000406985 692 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 RN7SKP27-201ENST00000410684 333 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 RPL7P8-201ENST00000411964 730 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 MTCO3P4-201ENST00000419236 787 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 MTCYBP24-201ENST00000420387 1106 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AL445528.1-201ENST00000426330 420 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 HMGB1P48-201ENST00000446155 598 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC108860.1-201ENST00000484521 383 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 POU5F1P7-201ENST00000508759 541 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC147055.1-201ENST00000509261 750 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 MTCO2P32-201ENST00000514865 403 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 FAM60DP-201ENST00000524174 632 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 MIR1254-2-201ENST00000579553 63 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC083760.1-201ENST00000589621 670 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 BNIP3P11-201ENST00000603878 563 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC069200.1-201ENST00000609511 323 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AL359535.1-201ENST00000612100 1087 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 U73479.1-201ENST00000618062 168 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 MTND5P7-201ENST00000413558 1798 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 AC002546.1-201ENST00000588041 2504 ntBASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS29Q9UBQ0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC010733.2-201ENST00000589496 5702 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 RNU1-35P-201ENST00000362782 153 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC093392.2-201ENST00000450682 337 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 RPL21P8-201ENST00000465083 535 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 RPL7P49-201ENST00000471402 708 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 HMGN2P13-201ENST00000476476 274 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC104687.1-201ENST00000485829 412 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC111193.1-201ENST00000504097 155 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 RNA5SP385-201ENST00000515947 110 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC009812.2-201ENST00000517657 457 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AP004371.1-201ENST00000525240 214 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC034268.2-201ENST00000571784 482 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC015871.2-201ENST00000603605 948 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC090115.4-201ENST00000609970 188 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AL020991.1-201ENST00000612314 373 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC010338.1-201ENST00000621823 717 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 AC009039.2-201ENST00000624524 529 ntBASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS29Q9UBQ0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 API5P2-201ENST00000397055 1498 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 DEFB109C-201ENST00000382575 264 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 DEFB109B-201ENST00000382656 264 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 RNA5SP171-201ENST00000391071 115 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 RNU1-101P-201ENST00000391171 127 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 RNA5SP129-201ENST00000410276 118 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 RPL21P40-201ENST00000428586 483 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 ATG10-AS1-201ENST00000504846 648 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC016065.2-201ENST00000514530 444 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC109635.4-202ENST00000531666 412 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AP002404.1-201ENST00000532005 451 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms