Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 Y_RNA.80-201ENST00000362996 102 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 Y_RNA.148-201ENST00000363557 117 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 Y_RNA.404-201ENST00000383978 102 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 RNU6-933P-201ENST00000384424 107 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 CYCSP33-201ENST00000414485 327 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC109638.1-201ENST00000417406 326 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 FDPSP6-201ENST00000425091 512 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 RPL21P66-201ENST00000426566 466 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 RANP8-201ENST00000444720 713 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC011005.2-201ENST00000487324 359 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 LINC01085-203ENST00000511195 326 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 Y_RNA.661-201ENST00000516003 99 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC007991.1-201ENST00000522680 631 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC008055.1-201ENST00000547032 609 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC084783.1-201ENST00000565846 910 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC136944.5-201ENST00000573021 151 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 RN7SL786P-201ENST00000579130 298 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 BNIP3P16-201ENST00000589779 534 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AL645944.1-201ENST00000603857 493 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AC007938.3-201ENST00000604965 623 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 AL160281.1-201ENST00000605307 311 ntBASIC7.81□□□□□ -1.16
RTN4Q9NQC3 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
RTN4Q9NQC3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 PNPT1P2-201ENST00000456768 2050 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RPL10P16-201ENST00000325000 645 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RN7SKP237-201ENST00000364663 301 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RNU1-115P-201ENST00000365329 160 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RNU6-596P-201ENST00000365395 98 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RNU6-306P-201ENST00000384617 107 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 MRPL42P3-201ENST00000401492 326 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RN7SKP114-201ENST00000410327 279 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC091390.3-201ENST00000426478 338 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC130472.1-201ENST00000427885 309 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 USP9YP30-201ENST00000430729 455 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 EEF1B2P3-201ENST00000447718 678 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RN7SL223P-201ENST00000470401 294 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC100832.1-201ENST00000471945 383 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC127024.1-201ENST00000490847 418 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC078817.1-201ENST00000492623 435 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC022493.1-201ENST00000492984 337 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 CEACAMP10-202ENST00000495431 496 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 RPL10P7-201ENST00000495649 625 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 Z99943.2-201ENST00000507585 266 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC023794.3-204ENST00000510754 236 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 PTP4A1P4-201ENST00000512479 322 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 SNORD116.3-201ENST00000517176 78 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AL359704.2-201ENST00000604335 521 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 AC024884.1-201ENST00000620583 399 ntBASIC7.8□□□□□ -1.16
RTN4Q9NQC3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RTN4Q9NQC3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms