Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC008379.1-201ENST00000463655 464 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 PRDX3P4-201ENST00000470828 747 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 RPL23AP11-201ENST00000475260 469 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC015908.1-201ENST00000478739 476 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 ACTR3P3-201ENST00000480448 893 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC092902.1-201ENST00000486999 259 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC112198.1-201ENST00000505369 1220 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 RNU6-467P-201ENST00000517027 110 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC004217.3-201ENST00000551552 878 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC015917.1-201ENST00000579654 510 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 LLPHP1-201ENST00000603571 367 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC112230.1-201ENST00000604342 547 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AL627309.6-201ENST00000606857 840 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC112503.2-201ENST00000609005 552 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 AL121772.2-201ENST00000614331 297 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 MIR6864-201ENST00000617935 70 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
HMG20AQ9NP66 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMG20AQ9NP66 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
HMG20AQ9NP66 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
HMG20AQ9NP66 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HMG20AQ9NP66 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HMG20AQ9NP66 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 SNORA63.3-201ENST00000362682 132 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RNA5SP479-201ENST00000364858 117 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL359837.1-201ENST00000381357 287 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AP002784.2-201ENST00000397300 549 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RN7SKP111-201ENST00000410349 271 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RNU6-272P-201ENST00000411028 104 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 CYCSP19-201ENST00000411715 316 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RPS15AP40-201ENST00000419621 391 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL035246.1-201ENST00000433554 1255 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 GOT2P5-201ENST00000433995 546 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 HMGN1P5-201ENST00000448591 263 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 PPIAP3-201ENST00000450588 505 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC093392.2-201ENST00000450682 337 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RPS27AP9-201ENST00000477681 438 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 GMPSP1-201ENST00000514075 579 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RNU1-95P-201ENST00000516357 160 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RNU1-128P-201ENST00000516704 160 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RN7SKP282-201ENST00000516824 299 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 RN7SKP277-201ENST00000516895 283 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 IGJP1-201ENST00000522682 475 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC103843.2-201ENST00000530523 682 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 GTF2IP22-201ENST00000554443 182 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 MTND4LP25-201ENST00000570218 163 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 MTCO3P24-201ENST00000572729 782 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC067852.3-201ENST00000589177 561 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC023043.3-201ENST00000593113 385 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC133794.1-201ENST00000602731 914 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AC006557.5-201ENST00000603126 811 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 BNIP3P19-201ENST00000605397 577 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 uc_338.1-201ENST00000612113 180 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL109659.3-201ENST00000624985 950 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL392088.2-201ENST00000637607 285 ntBASIC2.9□□□□□ -1.95
HMG20AQ9NP66 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
HMG20AQ9NP66 AL365440.1-201ENST00000436135 2167 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms