Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.65□□□□□ -1.66
SEC61A2Q9H9S3 SNORA63C-201ENST00000364578 129 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.474-201ENST00000384341 102 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 MIR589-201ENST00000385238 99 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RN7SKP140-201ENST00000411196 284 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 DPPA2P3-201ENST00000411853 655 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC009161.1-201ENST00000417306 376 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RGS17P1-201ENST00000423358 553 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 GPR143P-201ENST00000434155 205 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 HMGB1P18-201ENST00000438801 619 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AL138799.3-201ENST00000438968 350 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 MTND6P18-201ENST00000439477 513 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC004980.3-201ENST00000447046 365 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC005297.2-201ENST00000450430 606 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 PABPC1P3-201ENST00000469174 459 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 MTND4P17-201ENST00000470444 350 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RN7SL799P-201ENST00000475891 298 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC104563.1-201ENST00000476147 376 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC078785.3-201ENST00000476607 425 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RPL5P22-201ENST00000480199 884 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RPS15AP36-201ENST00000492022 382 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 HIGD1AP14-201ENST00000507617 282 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC110792.2-201ENST00000510278 224 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RNA5SP92-201ENST00000516437 110 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RNA5SP34-201ENST00000516887 130 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 SOD1P3-201ENST00000518682 454 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC079075.1-201ENST00000559543 878 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 RN7SL708P-201ENST00000580952 299 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 PRPF19P1-201ENST00000584766 898 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AL512329.2-201ENST00000607350 548 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 MIR6839-201ENST00000620425 113 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AL731566.1-201ENST00000620490 1937 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC000374.1-201ENST00000434698 1745 ntBASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SEC61A2Q9H9S3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 AC022031.1-201ENST00000585985 2593 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-729P-201ENST00000384399 107 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-441P-201ENST00000384545 106 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 MIR137-201ENST00000385223 102 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.579-201ENST00000390939 94 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 MIR548P-201ENST00000408336 84 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 VN1R36P-201ENST00000414936 291 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 AC108075.1-201ENST00000424692 529 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 DUTP6-201ENST00000425573 462 ntBASIC4.64□□□□□ -1.67
SEC61A2Q9H9S3 RPL36P19-201ENST00000430744 301 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms