Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL390240.1-201ENST00000612950 384 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC097460.3-201ENST00000623099 442 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL590396.4-201ENST00000636779 956 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL136164.4-201ENST00000625013 2135 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC007496.3-201ENST00000624987 3443 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AP002784.2-201ENST00000397300 549 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 RNA5SP31-201ENST00000411144 127 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC093578.1-201ENST00000415219 368 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 RPS6P14-201ENST00000425165 719 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC073063.1-201ENST00000434352 607 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 HMGN2P20-201ENST00000437531 273 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 CDC42P1-201ENST00000456658 548 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 RPL6P9-201ENST00000466502 859 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC010301.1-201ENST00000473936 355 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 SETP6-201ENST00000479329 568 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC112198.1-201ENST00000505369 1220 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC112518.2-201ENST00000508565 425 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 TRMT10BP1-201ENST00000519377 943 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC093331.1-201ENST00000521474 169 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 SNRPGP1-201ENST00000553864 222 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 MIR4474-201ENST00000579189 78 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 SNORD39.3-201ENST00000584451 71 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC133794.1-201ENST00000602731 914 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 CR392039.5-201ENST00000623201 510 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AL034408.1-202ENST00000636088 415 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 MIR7153-201ENST00000637758 57 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 AC130650.2-201ENST00000618736 2403 ntBASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC40Q9H9A6 ZNF542P-204ENST00000482727 1305 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 RNU6-730P-201ENST00000383954 104 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 RNU6-821P-201ENST00000390995 107 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 SKINT1L-201ENST00000401057 817 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 RNU4-65P-201ENST00000410473 140 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 RPL36AP36-201ENST00000418616 301 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 GLRXP1-201ENST00000423261 334 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 HSPD1P21-201ENST00000436541 245 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 MTND4P15-201ENST00000437913 1033 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 RPL21P23-201ENST00000446654 460 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 ARPC3P2-201ENST00000457786 533 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 FCF1P8-201ENST00000510322 597 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC019227.1-201ENST00000526902 510 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AL450489.1-201ENST00000612071 468 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC018755.4-201ENST00000619715 454 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AC243312.2-201ENST00000623340 601 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 ZNF826P-207ENST00000622273 1910 ntBASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms