Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC019178.2-201ENST00000423595 505 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 MUPP-201ENST00000438111 566 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 MTND4P6-201ENST00000438297 472 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC083863.1-201ENST00000438811 231 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 OFD1P3Y-201ENST00000453312 783 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 VN1R105P-201ENST00000486595 910 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC069240.1-201ENST00000548774 375 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC053481.3-201ENST00000577881 843 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 MIR4637-201ENST00000582405 84 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 BDH2P1-201ENST00000602288 736 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC009220.3-201ENST00000604318 586 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 SNORA51-201ENST00000606420 132 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 CYCSP41-201ENST00000616920 296 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 MIR6875-201ENST00000617506 72 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC010872.1-201ENST00000624225 675 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 OR4G11P-202ENST00000642116 1414 ntBASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4AQ9BY43 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AP005901.5-201ENST00000545779 1796 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 RNA5SP479-201ENST00000364858 117 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 RNU6-657P-201ENST00000383904 107 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AL138878.1-201ENST00000405131 347 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 SNORA3.3-201ENST00000408712 125 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 RPL17P36-201ENST00000420302 549 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC092427.1-201ENST00000439177 601 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 HMGB1P37-201ENST00000439613 609 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC093155.1-201ENST00000440164 826 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 RPL17P49-201ENST00000443728 411 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 HMGB3P6-201ENST00000444896 598 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 Z82190.1-201ENST00000454534 490 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC069306.1-201ENST00000507006 843 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 RNA5SP179-201ENST00000517284 121 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AP003102.1-201ENST00000525638 661 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 YPEL5P3-201ENST00000547227 352 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 TRAV15-201ENST00000556680 249 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC138915.2-201ENST00000569776 97 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 MIR3186-201ENST00000577404 85 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 MIR5047-201ENST00000579212 100 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AP001330.4-201ENST00000604350 154 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC068831.7-201ENST00000616954 363 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 5S_rRNA.12-201ENST00000617631 107 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC006111.3-201ENST00000622137 383 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 AC034229.5-201ENST00000624258 185 ntBASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CHMP4AQ9BY43 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHMP4AQ9BY43 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHMP4AQ9BY43 HSPA8P1-201ENST00000425843 1833 ntBASIC5.09□□□□□ -1.6
CHMP4AQ9BY43 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHMP4AQ9BY43 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 AL136372.1-201ENST00000403060 228 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 RNA5SP39-201ENST00000411245 120 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 MTCO1P39-201ENST00000426148 480 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 RPL7P2-201ENST00000427639 268 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 MTND2P20-201ENST00000440805 661 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 AL589880.1-201ENST00000448271 287 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 RPL39P6-201ENST00000448289 150 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 RPS11P1-201ENST00000451072 473 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 AL139099.1-201ENST00000497398 403 ntBASIC5.08□□□□□ -1.6
CHMP4AQ9BY43 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms