Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AP001086.1-201ENST00000494882 321 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 AC092045.1-201ENST00000495716 1231 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 AC021146.1-201ENST00000511202 716 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.43□□□□□ -2.02
VPS13AQ96RL7 AC135628.1-201ENST00000568867 534 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 AC015911.5-201ENST00000587076 451 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
VPS13AQ96RL7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13AQ96RL7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13AQ96RL7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13AQ96RL7 AC009570.1-201ENST00000609599 745 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 AC103710.2-201ENST00000609912 942 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.43□□□□□ -2.02
VPS13AQ96RL7 TTC39DP-201ENST00000416781 1688 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 GSTA9P-201ENST00000406231 611 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 NPM1P49-201ENST00000448027 714 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AC006539.3-201ENST00000454258 129 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AL390334.1-201ENST00000556395 450 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AL359715.4-201ENST00000606629 1436 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 RNU6-14P-201ENST00000384630 106 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 RPS12P23-201ENST00000419579 400 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AL365396.1-201ENST00000430854 671 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 snoU13.31-201ENST00000607291 104 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 BX005019.1-201ENST00000561881 1810 ntBASIC2.42□□□□□ -2.02
VPS13AQ96RL7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13AQ96RL7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 GCNT6-201ENST00000379591 934 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL121877.1-201ENST00000453704 622 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 RPL23AP49-201ENST00000492925 468 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC074029.1-201ENST00000552531 1044 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC020895.1-201ENST00000595362 272 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC011494.1-201ENST00000596454 237 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 MIR148B-201ENST00000362252 99 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 MTCO3P20-201ENST00000454926 688 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 RN7SL442P-201ENST00000473804 320 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC016687.1-201ENST00000482574 353 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 FABP5P12-201ENST00000515543 389 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AP001521.1-201ENST00000609150 300 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC090115.4-201ENST00000609970 188 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL162233.1-201ENST00000620014 944 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 MAPK10-373ENST00000641983 6772 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 MTND4P10-201ENST00000446199 1363 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC138915.3-201ENST00000562908 1389 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC069528.2-201ENST00000624849 1991 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC004987.3-201ENST00000413879 771 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC026436.1-201ENST00000510537 270 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.6-201ENST00000603753 252 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.11-201ENST00000604059 253 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.10-201ENST00000604330 253 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AC008162.1-201ENST00000604718 254 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.1-201ENST00000604752 252 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.2-201ENST00000604983 252 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.5-201ENST00000605253 252 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.4-201ENST00000605279 254 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.12-201ENST00000605291 253 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.8-201ENST00000605353 252 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.9-201ENST00000605428 253 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 AL670379.7-201ENST00000605823 252 ntBASIC2.41□□□□□ -2.02
VPS13AQ96RL7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13AQ96RL7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 ST13P20-201ENST00000447996 1065 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 RNA5SP480-201ENST00000516840 109 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 AC021733.2-201ENST00000518830 497 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 MIR4635-201ENST00000583759 79 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 AC027514.1-201ENST00000588561 1603 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VPS13AQ96RL7 AC006960.1-201ENST00000419980 153 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 AC010881.1-201ENST00000433830 235 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 RPS6P4-201ENST00000494693 758 ntBASIC2.4□□□□□ -2.03
VPS13AQ96RL7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms