Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 BNIP3P23-201ENST00000599655 511 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC068276.1-201ENST00000605793 379 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC025594.3-201ENST00000613068 790 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AL356121.2-201ENST00000624715 780 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 AC140479.6-201ENST00000633535 357 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 DCAF13P1-201ENST00000495256 1330 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP3Q96JB5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 RNU1-94P-201ENST00000362627 173 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 OR5H15-201ENST00000383696 930 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 SNORA11F-201ENST00000408237 128 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 MIR320C1-201ENST00000408566 88 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC109780.2-201ENST00000413467 845 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 RPS23P10-201ENST00000416185 486 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AL139095.3-201ENST00000419672 1203 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 RPL23AP74-201ENST00000437246 471 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 RPL29P29-201ENST00000448725 423 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 ARPC3P5-201ENST00000448802 534 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AP000926.1-201ENST00000479573 241 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 RNF138P1-201ENST00000502765 546 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 PTGES3P3-201ENST00000511479 482 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 HIGD1AP3-201ENST00000515857 278 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC090281.1-201ENST00000523019 276 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 RPL26P30-202ENST00000602923 645 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC007566.2-201ENST00000603642 413 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 AC025588.4-201ENST00000615802 908 ntBASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.86□□□□□ -1.63
CDK5RAP3Q96JB5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RNU6-289P-201ENST00000364093 107 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RNU6-777P-201ENST00000364265 104 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RNU6-952P-201ENST00000391164 108 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC025750.1-201ENST00000399891 379 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 MTCYBP36-201ENST00000404146 440 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AL389915.1-201ENST00000422463 466 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RBMY1KP-201ENST00000423480 476 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 PRELID3BP10-201ENST00000431957 584 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 CKS1BP5-201ENST00000434172 273 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC096638.2-201ENST00000434965 711 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 LSM1P1-201ENST00000438629 273 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RPL23AP52-201ENST00000439311 478 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 ATP5C1P1-201ENST00000441945 895 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 ABCF2P2-201ENST00000450549 296 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC009963.2-201ENST00000453431 138 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC091564.1-201ENST00000464563 479 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 PLGLA-201ENST00000465668 449 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 RN7SL459P-201ENST00000481078 302 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC090453.1-201ENST00000495560 436 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 STMN1P2-201ENST00000508435 439 ntBASIC4.85□□□□□ -1.63
CDK5RAP3Q96JB5 AC093809.1-201ENST00000509155 340 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms