Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL035413.2-201ENST00000604801 525 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 AL590282.1-201ENST00000610379 1136 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 AC090574.1-201ENST00000623186 233 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.32□□□□□ -1.56
DDX1Q92499 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX1Q92499 MIR1321-201ENST00000637766 79 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 GVINP1-202ENST00000531871 7271 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 SDAD1P1-202ENST00000524156 2051 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX1Q92499 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 AC011155.1-201ENST00000316512 456 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 SNORA70.10-201ENST00000384515 134 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 MTCO1P20-201ENST00000425366 358 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.31□□□□□ -1.56
DDX1Q92499 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX1Q92499 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX1Q92499 RPL7P11-201ENST00000437586 658 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.31□□□□□ -1.56
DDX1Q92499 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX1Q92499 AC002381.1-201ENST00000447049 280 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 NIPA2P5-201ENST00000452282 464 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 HMGB1P21-201ENST00000502313 581 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX1Q92499 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX1Q92499 COX6B1P5-201ENST00000509843 249 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX1Q92499 AP003072.1-201ENST00000531740 145 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AC107918.3-201ENST00000533272 382 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX1Q92499 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX1Q92499 MIR5697-201ENST00000578045 78 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX1Q92499 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX1Q92499 AC093799.2-201ENST00000610062 578 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AC009318.4-201ENST00000620496 486 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AC138965.3-201ENST00000623875 498 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX1Q92499 THAP12P5-201ENST00000405864 2275 ntBASIC5.31□□□□□ -1.56
DDX1Q92499 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX1Q92499 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX1Q92499 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DDX1Q92499 AC090971.4-201ENST00000560291 1800 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 AL672167.1-204ENST00000641875 3017 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
DDX1Q92499 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX1Q92499 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DDX1Q92499 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX1Q92499 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DDX1Q92499 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DDX1Q92499 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
DDX1Q92499 RNU4-79P-201ENST00000362764 141 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 Y_RNA.142-201ENST00000363491 102 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX1Q92499 RNU6-533P-201ENST00000384144 107 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 AC012065.2-201ENST00000421295 375 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 RAD23BP1-201ENST00000421404 1227 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 MTND2P23-201ENST00000422990 651 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 OR4F13P-201ENST00000428478 931 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.3□□□□□ -1.56
DDX1Q92499 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.3□□□□□ -1.56
DDX1Q92499 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DDX1Q92499 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 AL590365.1-201ENST00000450788 243 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 RN7SL354P-201ENST00000469282 294 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 AC103987.1-201ENST00000473394 348 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 RN7SL591P-201ENST00000496150 292 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX1Q92499 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.3□□□□□ -1.56
DDX1Q92499 SAP18P1-201ENST00000512058 390 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 ENPP7P9-201ENST00000514456 627 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 Y_RNA.675-201ENST00000516389 149 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 RNA5SP392-201ENST00000516905 112 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.3□□□□□ -1.56
DDX1Q92499 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.3□□□□□ -1.56
DDX1Q92499 OR5M7P-201ENST00000526140 972 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 AC022878.1-201ENST00000530684 149 ntBASIC5.3□□□□□ -1.56
DDX1Q92499 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DDX1Q92499 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
DDX1Q92499 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms