Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPL23AP61-201ENST00000623642 466 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC134882.1-201ENST00000603738 1676 ntBASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 RNU6-859P-201ENST00000362728 107 ntBASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 RN7SKP44-201ENST00000363602 316 ntBASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 AL513343.1-201ENST00000451818 792 ntBASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 AC008413.1-201ENST00000511864 177 ntBASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 RN7SKP283-201ENST00000517197 270 ntBASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 AC009039.2-201ENST00000624524 529 ntBASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.88□□□□□ -1.95
SHROOM3Q8TF72 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC087499.2-201ENST00000432861 149 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC089999.1-201ENST00000460336 374 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC126121.1-201ENST00000482313 553 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 KLHL2P1-201ENST00000508691 521 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC005046.1-201ENST00000608515 625 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC091948.2-201ENST00000636510 279 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC245100.2-201ENST00000454544 1679 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC012498.1-201ENST00000424037 437 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL138787.1-202ENST00000437804 898 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 RPS20P22-201ENST00000473700 357 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 SCGB1D5P-201ENST00000515134 247 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 EEF1A1P37-201ENST00000522748 715 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 BNIP3P8-201ENST00000597863 560 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AL450489.1-201ENST00000612071 468 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AP000720.1-201ENST00000625091 483 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 AC008264.2-201ENST00000610193 3731 ntBASIC2.87□□□□□ -1.95
SHROOM3Q8TF72 BX005019.1-201ENST00000561881 1810 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 RNU1-112P-201ENST00000364401 164 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 ISCA1P6-201ENST00000427740 390 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 ZFAND6P1-201ENST00000434138 605 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 RPL23AP74-201ENST00000437246 471 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 BUD31P2-201ENST00000449374 300 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 RNU6-491P-201ENST00000516099 110 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 RN7SKP272-201ENST00000516988 232 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AP003168.1-201ENST00000530091 307 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AL592494.3-201ENST00000609485 464 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 LRRC77P-213ENST00000637727 880 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 AC092593.1-201ENST00000515413 1815 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 FAM35BP-202ENST00000497389 3337 ntBASIC2.86□□□□□ -1.95
SHROOM3Q8TF72 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms