Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 USP9YP8-201ENST00000441913 500 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC011753.3-201ENST00000443436 406 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC005297.2-201ENST00000450430 606 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 snoU13.7-201ENST00000459220 104 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 RN7SL459P-201ENST00000481078 302 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC008628.2-201ENST00000502605 298 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC093767.1-201ENST00000504523 156 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 Y_RNA.704-201ENST00000516851 102 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AF235103.2-201ENST00000525753 346 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AP003072.2-201ENST00000527756 676 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 MIR4270-201ENST00000581799 70 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC110743.1-201ENST00000584870 478 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AL162413.1-201ENST00000603198 110 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC008745.1-201ENST00000604064 271 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AL009028.1-201ENST00000604895 802 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC009994.1-201ENST00000606889 253 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AP001642.1-201ENST00000624727 2117 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC017104.4-201ENST00000636283 1592 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC092125.1-201ENST00000562568 1995 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AL450345.1-202ENST00000605741 3881 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 Z97832.1-201ENST00000402490 328 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AL356421.1-201ENST00000403255 413 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC078974.1-201ENST00000411597 223 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RPL31P45-201ENST00000419532 356 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RPL34P6-201ENST00000432390 345 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC104850.1-201ENST00000435940 476 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RNA5SP103-201ENST00000459503 118 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 MTCO2P29-201ENST00000465212 189 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RPL36AP51-201ENST00000487216 318 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RPL23AP72-201ENST00000492447 435 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 GAPDHP56-201ENST00000506031 988 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RNU6-1281P-201ENST00000516223 105 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RNU6-875P-201ENST00000516488 106 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 RAB9BP1-201ENST00000519581 626 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 CBX3P5-201ENST00000552017 521 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 SETP2-201ENST00000553886 926 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC022884.2-201ENST00000578535 580 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AL356055.1-201ENST00000602528 446 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 C8orf59P2-201ENST00000603441 271 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 Y_RNA.804-201ENST00000615262 101 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC009318.4-201ENST00000620496 486 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AP000346.3-201ENST00000622821 210 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC006065.6-201ENST00000625201 545 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 AC073869.10-201ENST00000642016 354 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 SAMMSON-226ENST00000642089 1582 ntBASIC5.55□□□□□ -1.52
RUFY4Q6ZNE9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 PCAT14-202ENST00000627127 3935 ntBASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 Y_RNA.61-201ENST00000362835 102 ntBASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 RNA5SP505-201ENST00000364748 108 ntBASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 RNU6-398P-201ENST00000384143 109 ntBASIC5.54□□□□□ -1.52
RUFY4Q6ZNE9 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms