Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 RNA5SP246-201ENST00000458909 119 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 CBX3P7-201ENST00000532876 502 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC138915.2-201ENST00000569776 97 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 KPNA2P3-201ENST00000584190 848 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC006566.1-201ENST00000608943 513 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC005332.6-201ENST00000613178 446 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AC072046.2-201ENST00000618366 268 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 AL356596.1-201ENST00000624230 379 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 MTCO1P23-201ENST00000415223 1526 ntBASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF549Q6P9A3 ERCC6-202ENST00000374127 1782 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RNU6-694P-201ENST00000364071 147 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RNA5SP88-201ENST00000365560 109 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RNU6-225P-201ENST00000384613 103 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 Y_RNA.554-201ENST00000384672 102 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RNU4-25P-201ENST00000410569 230 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC016397.1-201ENST00000412463 242 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RPL23AP26-201ENST00000412728 464 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 BTF3P10-201ENST00000433415 495 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 ACTR3P2-201ENST00000439585 1257 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC010307.1-201ENST00000467206 836 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RN7SL481P-201ENST00000477764 299 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC091167.1-201ENST00000492017 396 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 OR4G11P-201ENST00000492842 939 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC108078.3-201ENST00000502633 489 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RNU6-506P-201ENST00000516553 94 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RAB9BP1-201ENST00000519581 626 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 PCMTD1P2-201ENST00000565017 355 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 RPL23AP87-202ENST00000573039 466 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 MIR3138-201ENST00000585238 82 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC005771.1-201ENST00000585581 349 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 LARP7P1-201ENST00000605576 316 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC004067.1-201ENST00000608733 700 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 MIR7973-1-201ENST00000614683 76 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AL359314.1-201ENST00000616913 261 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 MIR7151-201ENST00000617477 60 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AL356321.1-201ENST00000621360 228 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 MIR7641-1-201ENST00000627518 61 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 AC107982.1-201ENST00000507171 1300 ntBASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF549Q6P9A3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
ZNF549Q6P9A3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.09□□□□□ -1.76
ZNF549Q6P9A3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
ZNF549Q6P9A3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms