Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 DNAJC19P3-201ENST00000594491 331 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC093673.2-201ENST00000609674 331 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AC231759.1-201ENST00000616455 597 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 CYP3A51P-201ENST00000633513 256 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 AL672296.1-201ENST00000427780 2158 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NIPAL3Q6P499 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.33□□□□□ -1.88
NIPAL3Q6P499 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 RNU1-64P-201ENST00000365443 163 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 RNU6-1257P-201ENST00000384625 110 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC016769.3-201ENST00000396562 315 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AL590704.1-201ENST00000402856 794 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 RNU6-712P-201ENST00000410558 100 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 RPL17P36-201ENST00000420302 549 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 C1DP1-201ENST00000426049 402 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC006989.1-201ENST00000427212 131 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 SEPT7P5-201ENST00000434048 306 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 PCBP2P3-201ENST00000509726 843 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 USP9YP5-201ENST00000511770 630 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 ARL2BPP6-201ENST00000512757 439 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 DEFB130C-202ENST00000530001 230 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 MTND5P21-201ENST00000531961 522 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AL121766.1-201ENST00000547436 487 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC126177.3-201ENST00000551839 688 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC087481.2-201ENST00000565492 330 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AL451086.1-201ENST00000605596 223 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC091946.2-201ENST00000606105 291 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AC011816.2-201ENST00000607089 556 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 RMST_8.1-201ENST00000610287 165 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 AP003485.1-201ENST00000625093 753 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 MFSD8-245ENST00000641743 948 ntBASIC3.32□□□□□ -1.88
NIPAL3Q6P499 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NIPAL3Q6P499 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 DEFB109C-201ENST00000382575 264 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 DEFB109B-201ENST00000382656 264 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 MIR184-201ENST00000384962 84 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 U3.29-201ENST00000391296 212 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 SOD2P1-201ENST00000396543 562 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 MTND4P3-201ENST00000417829 541 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC093155.1-201ENST00000440164 826 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC004801.2-202ENST00000463559 283 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 RPL6P9-201ENST00000466502 859 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC108043.1-201ENST00000512696 574 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 OR7E13P-201ENST00000526052 910 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AL139174.1-201ENST00000531489 886 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 LRRC6P1-201ENST00000532188 885 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC008011.1-201ENST00000545989 227 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AL389895.1-201ENST00000554127 252 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 TRAV15-201ENST00000556680 249 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 SNORD84-203ENST00000584275 78 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AL035411.2-201ENST00000604022 421 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 BNIP3P31-201ENST00000604515 566 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms