Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TATDN1P1-201ENST00000414123 891 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 HMGB3P23-201ENST00000414981 585 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AL353678.1-201ENST00000422735 741 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AC068135.1-201ENST00000446164 246 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AC016696.1-201ENST00000446949 318 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 RN7SL807P-201ENST00000470923 297 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AC104115.2-201ENST00000523026 687 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AP003717.3-201ENST00000544832 1180 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 SNRPGP1-201ENST00000553864 222 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AC012468.1-201ENST00000604888 430 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 FRG1HP-204ENST00000617940 757 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PTPN20Q4JDL3 MTND5P1-201ENST00000445440 1375 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC073325.2-201ENST00000339545 159 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC110754.1-201ENST00000399740 601 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AL138880.1-201ENST00000405824 642 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 RPL23AP69-201ENST00000431134 458 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC034236.1-201ENST00000469891 373 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC114967.1-201ENST00000504890 259 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 SNORA76.2-201ENST00000517095 137 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC068657.1-201ENST00000520807 306 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC083923.1-201ENST00000523708 376 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC005156.1-201ENST00000613371 573 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 STMN1P1-201ENST00000617809 440 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC018816.2-201ENST00000621460 353 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AC099506.2-201ENST00000623074 221 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 AP006248.3-201ENST00000623580 594 ntBASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTPN20Q4JDL3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AC011978.2-201ENST00000569835 2054 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 MIR208A-201ENST00000362287 71 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 SNORA51.2-201ENST00000364595 132 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 OR52E6-202ENST00000379946 954 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 RPL23AP47-201ENST00000408017 460 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AC007899.1-201ENST00000412776 775 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AC073310.1-201ENST00000423226 1033 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AL451062.2-201ENST00000427515 271 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AC073508.1-201ENST00000428866 656 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 VDAC1P3-201ENST00000434069 851 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 B3GNT2P1-201ENST00000434960 952 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 HMGB1P12-201ENST00000438594 598 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 RNFT1P2-201ENST00000443064 757 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 Z99714.1-201ENST00000450463 807 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AL353718.1-201ENST00000451028 517 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 TXNP6-201ENST00000510190 310 ntBASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPN20Q4JDL3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms