Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL450489.1-201ENST00000612071 468 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC068057.2-201ENST00000624047 895 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP41Q3LFD5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP41Q3LFD5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP41Q3LFD5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP41Q3LFD5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP41Q3LFD5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP41Q3LFD5 RNU6-216P-201ENST00000363282 104 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 Y_RNA.169-201ENST00000363745 96 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 RNU6-621P-201ENST00000364752 109 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 SNORA73.2-201ENST00000364946 201 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 RNU1-89P-201ENST00000384592 164 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 U8.11-201ENST00000384699 133 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 U8.12-201ENST00000384701 133 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AL023807.1-201ENST00000407932 359 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC092647.1-201ENST00000420654 287 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC011233.1-201ENST00000422812 283 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 RPS25P9-201ENST00000435591 252 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AL354941.1-201ENST00000438600 464 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 OR6K5P-201ENST00000447050 945 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 MTCO3P2-201ENST00000457365 171 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 U8.18-201ENST00000459285 133 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 RN7SL585P-201ENST00000470538 280 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC010486.2-201ENST00000505572 483 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC109458.1-201ENST00000508858 316 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 PTP4A1P6-201ENST00000531034 478 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 SLC2A13P1-201ENST00000531560 322 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 ELOCP32-201ENST00000548625 324 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 SULT1C2P1-202ENST00000562418 459 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 MIR4458-201ENST00000578872 75 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 MIR3944-201ENST00000581277 108 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 AL139286.1-201ENST00000604465 483 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AC006270.3-201ENST00000605967 1036 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AL391497.1-201ENST00000608671 547 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP41Q3LFD5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP41Q3LFD5 ZNF542P-204ENST00000482727 1305 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 ZNF285B-201ENST00000561698 1767 ntBASIC4.17□□□□□ -1.74
USP41Q3LFD5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.17□□□□□ -1.74
USP41Q3LFD5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP41Q3LFD5 ELL2P4-201ENST00000446870 1376 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP41Q3LFD5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 SGO1P2-201ENST00000429458 1589 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP41Q3LFD5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 U1.1-201ENST00000384101 164 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 RNU6-1226P-201ENST00000384317 107 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 RNU6-1122P-201ENST00000384449 107 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 SNRPEP2-201ENST00000397592 279 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP41Q3LFD5 SSXP10-201ENST00000402595 565 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AL450338.1-201ENST00000407987 512 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 TIMM9P2-201ENST00000419324 266 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 RWDD4P2-201ENST00000426392 563 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC008065.1-201ENST00000428525 348 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 ART2BP-201ENST00000453501 499 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AL109741.2-201ENST00000455561 343 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC092757.1-201ENST00000467293 467 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms