Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 U3.7-201ENST00000363668 216 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 RNU6-682P-201ENST00000363843 106 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 Y_RNA.277-201ENST00000364754 102 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 SNORD20-201ENST00000384550 80 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 RNU6-306P-201ENST00000384617 107 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC096664.2-201ENST00000411843 406 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 HMGA1P8-201ENST00000414130 321 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AL360081.1-201ENST00000428299 555 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 LINC01399-202ENST00000458450 244 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 COPS8P2-201ENST00000473228 627 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 SIAH1P1-201ENST00000479411 923 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC114728.1-201ENST00000488289 483 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC116562.3-201ENST00000506136 177 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 IGKV2-36-201ENST00000519999 223 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC068587.5-201ENST00000528506 175 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 CBX3P4-201ENST00000538909 354 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 MIR1269B-201ENST00000580405 75 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 AC007342.5-201ENST00000571340 2142 ntBASIC6.43□□□□□ -1.38
CTC1Q2NKJ3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AC097504.1-201ENST00000515103 2415 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RNA5SP500-201ENST00000364486 119 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RNU6-225P-201ENST00000384613 103 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 MIR558-201ENST00000384920 94 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AL096829.1-201ENST00000413677 457 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AC022022.1-201ENST00000430304 178 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AL031663.1-201ENST00000437445 219 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 PTMAP6-201ENST00000439110 327 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RPL23AP12-201ENST00000467573 473 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RPL21P93-201ENST00000480465 489 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RN7SL727P-201ENST00000482164 296 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AC093270.2-201ENST00000486157 792 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AC093815.1-201ENST00000508637 280 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RNU7-200P-201ENST00000516105 62 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RNU6-62P-201ENST00000516526 102 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 RNU6-861P-201ENST00000516745 106 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 SCARNA6.1-201ENST00000516989 238 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 IGHV1-14-201ENST00000523391 241 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 OR11H5P-201ENST00000554039 926 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AC127381.1-201ENST00000555979 939 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AC011494.1-201ENST00000596454 237 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AL031666.3-201ENST00000609320 1006 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 CDC27P2-201ENST00000425026 1922 ntBASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CTC1Q2NKJ3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC012254.3-201ENST00000591183 2117 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 Y_RNA.105-201ENST00000363182 111 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 Y_RNA.237-201ENST00000364439 102 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RNU6-1078P-201ENST00000364522 103 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RNU6-641P-201ENST00000384006 107 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 SNORA70-201ENST00000384436 135 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 SNORA22C-201ENST00000384614 134 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RNU6-1151P-201ENST00000384684 107 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms