Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC004024.1-201ENST00000549244 247 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX1Q15475 OR4U1P-201ENST00000554958 912 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.53□□□□□ -1.84
SIX1Q15475 MIR3912-201ENST00000577566 105 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX1Q15475 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX1Q15475 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX1Q15475 AC113368.1-201ENST00000603736 382 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX1Q15475 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX1Q15475 OR6R2P-201ENST00000609216 300 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC079395.3-201ENST00000615161 484 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC009318.3-201ENST00000616916 503 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC243756.2-201ENST00000618406 463 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC109809.1-201ENST00000619665 545 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 CR392039.5-201ENST00000623201 510 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC097520.1-201ENST00000624435 385 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX1Q15475 OR8B1P-202ENST00000641132 1178 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX1Q15475 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SIX1Q15475 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIX1Q15475 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX1Q15475 AL592437.2-201ENST00000421655 2434 ntBASIC3.53□□□□□ -1.84
SIX1Q15475 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.53□□□□□ -1.85
SIX1Q15475 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX1Q15475 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 RNU6-839P-201ENST00000363347 108 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 RNA5SP197-201ENST00000363357 119 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 RNU4-28P-201ENST00000364739 141 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 RNU6-413P-201ENST00000384115 107 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC126124.2-201ENST00000413542 321 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 PRELID3BP11-201ENST00000414230 479 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 KRR1P1-201ENST00000419430 803 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX1Q15475 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX1Q15475 RPL23AP22-201ENST00000437556 453 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 ISCA1P2-201ENST00000438679 421 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 HMGB1P48-201ENST00000446155 598 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AL133547.1-201ENST00000448546 220 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC098826.2-201ENST00000452011 651 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC091564.1-201ENST00000464563 479 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 S100A11P1-201ENST00000477525 312 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC005726.1-201ENST00000494679 427 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC108078.3-201ENST00000502633 489 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 DYNLL1P6-201ENST00000503440 264 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC114322.1-201ENST00000506771 926 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC048346.1-201ENST00000510247 144 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC112673.1-201ENST00000513168 575 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 RNU1-143P-201ENST00000516296 146 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 RNA5SP135-201ENST00000517019 125 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 IGKV2D-23-201ENST00000518179 286 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX1Q15475 AP001269.3-201ENST00000588718 329 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC006116.10-201ENST00000591836 581 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 BNIP3P22-201ENST00000593399 556 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC008687.2-201ENST00000597865 520 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC021749.1-201ENST00000604322 607 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 U1.23-201ENST00000610293 146 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC105227.2-201ENST00000615075 605 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX1Q15475 RNU1-68P-201ENST00000615382 146 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC013470.4-201ENST00000619978 986 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX1Q15475 U1.39-201ENST00000621562 146 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AC011330.2-201ENST00000621680 635 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX1Q15475 AC127502.3-201ENST00000636170 1206 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX1Q15475 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX1Q15475 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX1Q15475 AL645937.1-201ENST00000641739 1652 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 AL161912.2-201ENST00000565707 3007 ntBASIC3.52□□□□□ -1.85
SIX1Q15475 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
SIX1Q15475 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIX1Q15475 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX1Q15475 AC017071.1-201ENST00000564407 2204 ntBASIC3.51□□□□□ -1.85
SIX1Q15475 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX1Q15475 SEPT7P7-201ENST00000420492 1301 ntBASIC3.51□□□□□ -1.85
SIX1Q15475 DCAF13P3-201ENST00000561147 1334 ntBASIC3.51□□□□□ -1.85
SIX1Q15475 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms