Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC096725.1-201ENST00000514266 313 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 UBTFL10-201ENST00000528532 562 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC009039.2-201ENST00000624524 529 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC009950.2-201ENST00000636548 183 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1SQ13698 AC092593.1-201ENST00000515413 1815 ntBASIC3.31□□□□□ -1.88
CACNA1SQ13698 RNA5SP105-201ENST00000391123 113 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 AL137014.1-201ENST00000420490 1226 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 BX276092.3-201ENST00000424182 230 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 HMGN2P3-201ENST00000433603 273 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 HMGN2P5-201ENST00000436882 273 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 AL353093.1-201ENST00000441292 436 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 AC012170.1-201ENST00000495139 359 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 AGGF1P8-201ENST00000562979 1000 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 AC007621.1-201ENST00000604544 437 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 CTSLP2-204ENST00000629029 392 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CACNA1SQ13698 RNU6-225P-201ENST00000384613 103 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CACNA1SQ13698 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 CASP3P1-201ENST00000446037 609 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 RPL23AP14-201ENST00000468281 468 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 DYNLL1P6-201ENST00000503440 264 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 AC025754.2-201ENST00000606491 432 ntBASIC3.3□□□□□ -1.88
CACNA1SQ13698 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CACNA1SQ13698 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.3□□□□□ -1.88
CACNA1SQ13698 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
CACNA1SQ13698 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CACNA1SQ13698 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CACNA1SQ13698 AL513477.1-202ENST00000417061 214 ntBASIC3.29□□□□□ -1.88
CACNA1SQ13698 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.29□□□□□ -1.88
CACNA1SQ13698 MTCO3P17-201ENST00000443775 513 ntBASIC3.29□□□□□ -1.88
CACNA1SQ13698 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.29□□□□□ -1.88
CACNA1SQ13698 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.29□□□□□ -1.88
CACNA1SQ13698 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.29□□□□□ -1.88
CACNA1SQ13698 IGKV3-31-201ENST00000523109 329 ntBASIC3.29□□□□□ -1.88
CACNA1SQ13698 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.29□□□□□ -1.88
CACNA1SQ13698 BMS1P7-201ENST00000602440 1052 ntBASIC3.29□□□□□ -1.88
CACNA1SQ13698 AC090115.4-201ENST00000609970 188 ntBASIC3.29□□□□□ -1.88
CACNA1SQ13698 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.29□□□□□ -1.88
CACNA1SQ13698 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CACNA1SQ13698 AL139811.1-201ENST00000424779 2299 ntBASIC3.29□□□□□ -1.88
CACNA1SQ13698 FAM133CP-201ENST00000332869 704 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 SNORA70E-201ENST00000384492 135 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 UBE2D3P1-201ENST00000436669 444 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 SMARCE1P4-201ENST00000523647 241 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 AL109741.3-201ENST00000561748 592 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 MIR4635-201ENST00000583759 79 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 AC010200.2-201ENST00000605098 235 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 AC241585.2-209ENST00000638217 143 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 MTND5P19-201ENST00000424872 1794 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 MIR26A1-201ENST00000362205 77 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CACNA1SQ13698 TRGV6-201ENST00000417928 299 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 AL049610.1-201ENST00000423374 372 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 AC112220.1-201ENST00000434628 355 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 RPL23AP62-201ENST00000463396 453 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 RPS29P21-201ENST00000496272 170 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 AP001646.1-201ENST00000527936 915 ntBASIC3.28□□□□□ -1.88
CACNA1SQ13698 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.28□□□□□ -1.88
CACNA1SQ13698 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1SQ13698 AP006437.1-201ENST00000641440 3685 ntBASIC3.27□□□□□ -1.89
CACNA1SQ13698 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.27□□□□□ -1.89
CACNA1SQ13698 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.27□□□□□ -1.89
CACNA1SQ13698 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1SQ13698 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CACNA1SQ13698 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1SQ13698 RNVU1-3-201ENST00000364313 161 ntBASIC3.27□□□□□ -1.89
CACNA1SQ13698 RNU6-304P-201ENST00000364855 107 ntBASIC3.27□□□□□ -1.89
CACNA1SQ13698 OR51A3P-201ENST00000413596 924 ntBASIC3.27□□□□□ -1.89
CACNA1SQ13698 AL451074.5-201ENST00000415894 435 ntBASIC3.27□□□□□ -1.89
CACNA1SQ13698 FCF1P1-201ENST00000432690 571 ntBASIC3.27□□□□□ -1.89
CACNA1SQ13698 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.27□□□□□ -1.89
CACNA1SQ13698 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CACNA1SQ13698 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms