Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TFF3Q07654 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.33□□□□□ -2.04
TFF3Q07654 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.33□□□□□ -2.04
TFF3Q07654 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.33□□□□□ -2.04
TFF3Q07654 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.33□□□□□ -2.04
TFF3Q07654 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.32□□□□□ -2.04
TFF3Q07654 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TFF3Q07654 RPS4XP7-201ENST00000406274 780 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.32□□□□□ -2.04
TFF3Q07654 MUPP-201ENST00000438111 566 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 GSTA11P-201ENST00000452866 669 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.32□□□□□ -2.04
TFF3Q07654 RPS27AP9-201ENST00000477681 438 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 RN7SL499P-201ENST00000481141 276 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.32□□□□□ -2.04
TFF3Q07654 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.32□□□□□ -2.04
TFF3Q07654 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.32□□□□□ -2.04
TFF3Q07654 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.32□□□□□ -2.04
TFF3Q07654 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.32□□□□□ -2.04
TFF3Q07654 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.32□□□□□ -2.04
TFF3Q07654 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.32□□□□□ -2.04
TFF3Q07654 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.32□□□□□ -2.04
TFF3Q07654 AC012531.5-201ENST00000611375 151 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 Z99129.2-201ENST00000619967 314 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 ZNF658B-202ENST00000615961 3375 ntBASIC2.32□□□□□ -2.04
TFF3Q07654 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TFF3Q07654 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TFF3Q07654 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.32□□□□□ -2.04
TFF3Q07654 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TFF3Q07654 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.31□□□□□ -2.04
TFF3Q07654 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 UBL5P3-201ENST00000475112 231 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AC078785.3-201ENST00000476607 425 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AP000926.1-201ENST00000479573 241 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 RN7SL297P-201ENST00000483161 293 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 TRAV31-201ENST00000502780 342 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 ANXA2P1-201ENST00000505539 926 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.31□□□□□ -2.04
TFF3Q07654 RNU6-237P-201ENST00000515985 71 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 RNA5SP309-201ENST00000516670 106 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.31□□□□□ -2.04
TFF3Q07654 MTND5P21-201ENST00000531961 522 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AP000857.1-201ENST00000532151 543 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AC007536.1-201ENST00000533382 349 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 ELOCP31-201ENST00000540463 467 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.31□□□□□ -2.04
TFF3Q07654 DNAJC19P3-201ENST00000594491 331 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AL627309.6-201ENST00000606857 840 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 RNU6-84P-201ENST00000607737 102 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 AC025034.2-201ENST00000623264 286 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 FRG1DP-201ENST00000635586 771 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 LRRC77P-213ENST00000637727 880 ntBASIC2.31□□□□□ -2.04
TFF3Q07654 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TFF3Q07654 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TFF3Q07654 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.3□□□□□ -2.04
TFF3Q07654 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.3□□□□□ -2.04
TFF3Q07654 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TFF3Q07654 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.3□□□□□ -2.04
TFF3Q07654 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TFF3Q07654 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TFF3Q07654 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TFF3Q07654 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.3□□□□□ -2.04
TFF3Q07654 SNORA36C-201ENST00000384289 132 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.3□□□□□ -2.04
TFF3Q07654 SAR1AP4-201ENST00000429225 591 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 COX6CP2-201ENST00000444980 225 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 RPL39P40-201ENST00000445481 146 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 RPL36AP33-201ENST00000450395 310 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 RPL23AP31-201ENST00000456160 467 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 CFTRP1-201ENST00000456646 183 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 AP000916.1-201ENST00000533869 835 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.3□□□□□ -2.04
TFF3Q07654 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.3□□□□□ -2.04
TFF3Q07654 MTCO3P13-201ENST00000577757 781 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 AP000526.1-201ENST00000603308 1388 ntBASIC2.3□□□□□ -2.04
TFF3Q07654 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.3□□□□□ -2.04
TFF3Q07654 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.29□□□□□ -2.04
TFF3Q07654 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TFF3Q07654 AC063923.1-201ENST00000478982 1619 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 OR56A5-201ENST00000340110 738 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 RNA5SP289-201ENST00000362332 137 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 AL355379.1-201ENST00000405542 640 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.29□□□□□ -2.04
TFF3Q07654 MRPL50P4-201ENST00000446432 475 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 FDX1P2-201ENST00000450769 375 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 AL590639.1-201ENST00000456484 337 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 snoU13.26-201ENST00000459452 105 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 AC021205.1-201ENST00000468797 348 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.29□□□□□ -2.04
TFF3Q07654 AL133271.1-201ENST00000538229 291 ntBASIC2.29□□□□□ -2.04
TFF3Q07654 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TFF3Q07654 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TFF3Q07654 AC092079.1-201ENST00000558620 1985 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms