Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AL022400.1-201ENST00000423946 935 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 RPL23AP35-201ENST00000451906 501 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AC133473.1-201ENST00000455173 299 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 ATG12P2-201ENST00000456830 416 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AC147055.4-201ENST00000504399 745 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 VWA8P1-201ENST00000510889 176 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 TRMT10BP1-201ENST00000519377 943 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AL139174.1-201ENST00000531489 886 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.39□□□□□ -1.71
UBE3AQ05086 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 MIR4999-201ENST00000585029 91 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AC008751.2-201ENST00000597885 980 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AC080013.4-201ENST00000607624 649 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AL607023.1-201ENST00000620045 248 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 AC244100.1-202ENST00000621554 382 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
UBE3AQ05086 AC097655.1-201ENST00000635075 318 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBE3AQ05086 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
UBE3AQ05086 MAPK10-372ENST00000641954 3413 ntBASIC4.39□□□□□ -1.71
UBE3AQ05086 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3AQ05086 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3AQ05086 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3AQ05086 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3AQ05086 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3AQ05086 SNORA63.1-201ENST00000362493 131 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3AQ05086 RNU6-878P-201ENST00000384578 110 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 SNORD66.1-201ENST00000391230 76 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 RPL17P50-201ENST00000396131 546 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3AQ05086 HMGB1P17-201ENST00000403495 628 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 RNA5SP56-201ENST00000410277 118 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AL160275.2-201ENST00000412010 394 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3AQ05086 AL161631.1-201ENST00000417933 486 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC098592.1-201ENST00000419352 333 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC069157.1-201ENST00000421749 137 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 GLRXP1-201ENST00000423261 334 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 YME1L1P1-201ENST00000429435 297 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 RPS6P15-201ENST00000431996 751 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 ELOCP18-201ENST00000434209 337 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 MTND1P26-201ENST00000440488 538 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3AQ05086 RPS20P24-201ENST00000457473 361 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3AQ05086 AC087312.1-201ENST00000471411 480 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3AQ05086 AC090453.1-201ENST00000495560 436 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC109458.1-201ENST00000508858 316 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3AQ05086 IGKV2-23-201ENST00000518729 323 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC090151.1-201ENST00000520784 730 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.38□□□□□ -1.71
UBE3AQ05086 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3AQ05086 HSPA8P13-201ENST00000523715 472 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3AQ05086 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3AQ05086 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3AQ05086 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3AQ05086 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.38□□□□□ -1.71
UBE3AQ05086 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.38□□□□□ -1.71
UBE3AQ05086 MIR5186-201ENST00000577504 120 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3AQ05086 AL669831.4-202ENST00000590817 238 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC083899.3-201ENST00000603413 594 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 AC025588.4-201ENST00000615802 908 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBE3AQ05086 AC004943.3-201ENST00000624116 600 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3AQ05086 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3AQ05086 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
UBE3AQ05086 EOGT-210ENST00000615922 1931 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 FAM91A3P-201ENST00000456826 2544 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
UBE3AQ05086 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3AQ05086 AP000526.1-201ENST00000603308 1388 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.38□□□□□ -1.71
UBE3AQ05086 AC012020.1-201ENST00000624541 1728 ntBASIC4.38□□□□□ -1.71
UBE3AQ05086 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.37□□□□□ -1.71
UBE3AQ05086 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
UBE3AQ05086 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3AQ05086 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3AQ05086 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.37□□□□□ -1.71
UBE3AQ05086 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.37□□□□□ -1.71
UBE3AQ05086 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.37□□□□□ -1.71
UBE3AQ05086 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3AQ05086 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBE3AQ05086 RNA5SP119-201ENST00000362715 117 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms