Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.41□□□□□ -1.7
E2F1Q01094 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.41□□□□□ -1.7
E2F1Q01094 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.41□□□□□ -1.7
E2F1Q01094 AC109347.2-201ENST00000610220 349 ntBASIC4.41□□□□□ -1.7
E2F1Q01094 AL359535.1-201ENST00000612100 1087 ntBASIC4.41□□□□□ -1.7
E2F1Q01094 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.41□□□□□ -1.7
E2F1Q01094 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.41□□□□□ -1.7
E2F1Q01094 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
E2F1Q01094 DDX18P3-201ENST00000404856 2007 ntBASIC4.41□□□□□ -1.7
E2F1Q01094 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
E2F1Q01094 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
E2F1Q01094 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
E2F1Q01094 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
E2F1Q01094 RNA5SP366-201ENST00000365454 123 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 SNORA51.6-201ENST00000384151 125 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 SNORA40.3-201ENST00000390964 122 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 Y_RNA.582-201ENST00000391023 95 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 ARF4P3-201ENST00000397387 509 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 DHFRP6-201ENST00000401776 268 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AL023807.1-201ENST00000407932 359 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 MIR320C1-201ENST00000408566 88 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 RPL23AP26-201ENST00000412728 464 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AIMP1P1-201ENST00000418670 937 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 EIF1P1-201ENST00000421436 341 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.4□□□□□ -1.71
E2F1Q01094 AC096632.1-201ENST00000427395 310 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC109583.1-201ENST00000432156 268 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC023347.2-201ENST00000433994 462 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.4□□□□□ -1.71
E2F1Q01094 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.4□□□□□ -1.71
E2F1Q01094 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.4□□□□□ -1.71
E2F1Q01094 RPL23AP93-201ENST00000440847 484 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 NANOGNBP1-201ENST00000448444 480 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 USP9YP12-201ENST00000450481 570 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AL033528.1-201ENST00000453780 140 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC108751.2-201ENST00000469993 231 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC017015.1-201ENST00000477387 286 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
E2F1Q01094 RN7SL809P-201ENST00000482040 297 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
E2F1Q01094 KCTD9P2-201ENST00000512203 1013 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AF131216.2-201ENST00000512316 564 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.4□□□□□ -1.71
E2F1Q01094 AP003730.1-201ENST00000524605 285 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.4□□□□□ -1.71
E2F1Q01094 MTCYBP41-201ENST00000528913 1123 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 CYCSP29-201ENST00000533731 318 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.4□□□□□ -1.71
E2F1Q01094 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.4□□□□□ -1.71
E2F1Q01094 LSM6P2-201ENST00000552208 177 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 FKBP1BP1-201ENST00000553366 325 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.4□□□□□ -1.71
E2F1Q01094 AC025884.1-201ENST00000556034 378 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.4□□□□□ -1.71
E2F1Q01094 AGGF1P8-201ENST00000562979 1000 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 RN7SL176P-201ENST00000580352 264 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 MIR4307-201ENST00000582802 84 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 MAGOH2P-202ENST00000584384 429 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC110743.1-201ENST00000584870 478 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.4□□□□□ -1.71
E2F1Q01094 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.4□□□□□ -1.71
E2F1Q01094 AC131902.3-201ENST00000611767 581 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 LINC00901.1-201ENST00000617252 152 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC068722.2-201ENST00000618734 544 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.4□□□□□ -1.71
E2F1Q01094 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.4□□□□□ -1.71
E2F1Q01094 MIR3653-201ENST00000625572 110 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
E2F1Q01094 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.4□□□□□ -1.71
E2F1Q01094 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.4□□□□□ -1.71
E2F1Q01094 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
E2F1Q01094 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
E2F1Q01094 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
E2F1Q01094 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
E2F1Q01094 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
E2F1Q01094 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.4□□□□□ -1.71
E2F1Q01094 MTND5P26-201ENST00000426018 1752 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 AC097504.1-201ENST00000515103 2415 ntBASIC4.4□□□□□ -1.71
E2F1Q01094 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
E2F1Q01094 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
E2F1Q01094 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.39□□□□□ -1.71
E2F1Q01094 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
E2F1Q01094 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
E2F1Q01094 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
E2F1Q01094 AC009229.4-201ENST00000623854 1947 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.39□□□□□ -1.71
E2F1Q01094 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
E2F1Q01094 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
E2F1Q01094 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.39□□□□□ -1.71
E2F1Q01094 SNORA37-201ENST00000384504 129 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 MIR23B-201ENST00000384832 97 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 EIF5P1-201ENST00000400019 1231 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 MIR1305-201ENST00000408300 86 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 Y_RNA.598-201ENST00000410480 95 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.39□□□□□ -1.71
E2F1Q01094 USP9YP13-201ENST00000417797 480 ntBASIC4.39□□□□□ -1.71
E2F1Q01094 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms