Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RNU4-60P-201ENST00000517239 135 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK3Q00526 AC069240.1-201ENST00000548774 375 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 ZNF321P-202ENST00000550843 495 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK3Q00526 AC009094.1-201ENST00000564443 426 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK3Q00526 AC087499.8-201ENST00000578406 226 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 MIR1254-2-201ENST00000579553 63 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 MIR4637-201ENST00000582405 84 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK3Q00526 BNIP3P24-201ENST00000593398 557 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK3Q00526 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK3Q00526 DPRXP5-201ENST00000604662 539 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AC128687.2-201ENST00000609657 566 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK3Q00526 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK3Q00526 AC005344.1-201ENST00000613391 459 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK3Q00526 RMST_9.1-201ENST00000619945 193 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK3Q00526 AC007490.1-201ENST00000624321 703 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK3Q00526 AC017037.3-201ENST00000625016 472 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK3Q00526 GDI2P1-201ENST00000429312 1336 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 AC104454.1-201ENST00000421341 1401 ntBASIC3.83□□□□□ -1.8
CDK3Q00526 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK3Q00526 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK3Q00526 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK3Q00526 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK3Q00526 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 AC097504.1-201ENST00000515103 2415 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 MTND5P24-201ENST00000438892 1767 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 MTCO1P14-201ENST00000441695 1559 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 MTCO1P23-201ENST00000415223 1526 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AP004289.2-201ENST00000444413 1457 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CDK3Q00526 Y_RNA.493-201ENST00000384422 102 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 MIR513A2-201ENST00000385249 127 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 RPL23AP29-201ENST00000397284 453 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 RN7SKP27-201ENST00000410684 333 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 AC092447.3-201ENST00000426027 686 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 Z74696.2-201ENST00000436514 498 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC127537.2-201ENST00000439258 465 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK3Q00526 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK3Q00526 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK3Q00526 RPL26P28-201ENST00000451325 435 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK3Q00526 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 AC068587.2-201ENST00000478386 781 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC004263.1-201ENST00000479327 332 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 RPL7P24-201ENST00000493052 752 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC012170.1-201ENST00000495139 359 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 OR5H5P-201ENST00000503164 928 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 AC093853.1-201ENST00000515689 483 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 SCARNA14-201ENST00000516903 136 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC105185.1-201ENST00000518705 535 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK3Q00526 AP003461.1-201ENST00000528866 78 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 DUXAP5-201ENST00000529668 529 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CDK3Q00526 MTND3P12-201ENST00000559068 328 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK3Q00526 MAGOH2P-202ENST00000584384 429 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK3Q00526 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK3Q00526 NIFKP6-201ENST00000598115 845 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.82□□□□□ -1.8
CDK3Q00526 ELOCP35-201ENST00000604289 336 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK3Q00526 AL139418.1-201ENST00000613613 177 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 U73479.1-201ENST00000618062 168 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC073968.1-201ENST00000618594 637 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AC231657.1-201ENST00000624313 397 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK3Q00526 CYP3A51P-201ENST00000633513 256 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 ZNF962P-201ENST00000443465 3140 ntBASIC3.82□□□□□ -1.8
CDK3Q00526 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK3Q00526 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CDK3Q00526 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CDK3Q00526 MTND5P3-201ENST00000438536 1800 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms