Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.64□□□□□ -2.15
RPL39P62891 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.64□□□□□ -2.15
RPL39P62891 AP000936.2-201ENST00000447151 681 ntBASIC1.64□□□□□ -2.15
RPL39P62891 SNORD109B-201ENST00000458961 67 ntBASIC1.64□□□□□ -2.15
RPL39P62891 SNORD109A-201ENST00000459128 67 ntBASIC1.64□□□□□ -2.15
RPL39P62891 RPL7P49-201ENST00000471402 708 ntBASIC1.64□□□□□ -2.15
RPL39P62891 RPL36AP51-201ENST00000487216 318 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.64□□□□□ -2.15
RPL39P62891 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.64□□□□□ -2.15
RPL39P62891 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.64□□□□□ -2.15
RPL39P62891 COX6CP8-201ENST00000522620 226 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC1.64□□□□□ -2.15
RPL39P62891 CASP1-216ENST00000534497 825 ntTSL 5 BASIC1.64□□□□□ -2.15
RPL39P62891 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.64□□□□□ -2.15
RPL39P62891 CD24P2-201ENST00000565486 219 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.64□□□□□ -2.15
RPL39P62891 AC008687.2-201ENST00000597865 520 ntBASIC1.64□□□□□ -2.15
RPL39P62891 SRGNP1-201ENST00000603392 451 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AC093732.2-201ENST00000607950 274 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AP004607.9-201ENST00000618202 316 ntBASIC1.64□□□□□ -2.15
RPL39P62891 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.64□□□□□ -2.15
RPL39P62891 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.64□□□□□ -2.15
RPL39P62891 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
RPL39P62891 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPL39P62891 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.63□□□□□ -2.15
RPL39P62891 AC092435.3-201ENST00000565538 3654 ntBASIC1.63□□□□□ -2.15
RPL39P62891 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPL39P62891 RNU2-52P-201ENST00000410680 190 ntBASIC1.63□□□□□ -2.15
RPL39P62891 USP9YP27-201ENST00000418455 438 ntBASIC1.63□□□□□ -2.15
RPL39P62891 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.63□□□□□ -2.15
RPL39P62891 AC009965.2-201ENST00000425328 970 ntBASIC1.63□□□□□ -2.15
RPL39P62891 RPS15AP28-201ENST00000435088 386 ntBASIC1.63□□□□□ -2.15
RPL39P62891 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.63□□□□□ -2.15
RPL39P62891 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC1.63□□□□□ -2.15
RPL39P62891 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.63□□□□□ -2.15
RPL39P62891 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL39P62891 AC104435.1-201ENST00000483483 166 ntBASIC1.63□□□□□ -2.15
RPL39P62891 GZMAP1-201ENST00000503054 631 ntBASIC1.63□□□□□ -2.15
RPL39P62891 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL39P62891 AC026436.1-201ENST00000510537 270 ntBASIC1.63□□□□□ -2.15
RPL39P62891 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.63□□□□□ -2.15
RPL39P62891 CR383656.14-201ENST00000551951 406 ntBASIC1.63□□□□□ -2.15
RPL39P62891 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.63□□□□□ -2.15
RPL39P62891 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.63□□□□□ -2.15
RPL39P62891 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.63□□□□□ -2.15
RPL39P62891 RPL12P50-201ENST00000603116 116 ntBASIC1.63□□□□□ -2.15
RPL39P62891 AC244100.1-202ENST00000621554 382 ntBASIC1.63□□□□□ -2.15
RPL39P62891 AP003400.2-201ENST00000624036 666 ntBASIC1.63□□□□□ -2.15
RPL39P62891 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPL39P62891 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPL39P62891 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPL39P62891 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL39P62891 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPL39P62891 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPL39P62891 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPL39P62891 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.62□□□□□ -2.15
RPL39P62891 MIR144-201ENST00000384886 86 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL39P62891 MTATP6P11-201ENST00000428071 670 ntBASIC1.62□□□□□ -2.15
RPL39P62891 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
RPL39P62891 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.62□□□□□ -2.15
RPL39P62891 HIGD1AP11-201ENST00000438361 280 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AL031659.1-201ENST00000447075 539 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AC104978.1-201ENST00000449387 391 ntBASIC1.62□□□□□ -2.15
RPL39P62891 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC1.62□□□□□ -2.15
RPL39P62891 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.62□□□□□ -2.15
RPL39P62891 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL39P62891 ARL4AP2-201ENST00000507378 601 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AC005921.1-201ENST00000510589 286 ntBASIC1.62□□□□□ -2.15
RPL39P62891 RN7SKP132-201ENST00000516001 208 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.62□□□□□ -2.15
RPL39P62891 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.62□□□□□ -2.15
RPL39P62891 AC105137.2-201ENST00000569073 466 ntBASIC1.62□□□□□ -2.15
RPL39P62891 VN1R90P-201ENST00000595717 726 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AL049844.2-201ENST00000604280 628 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AC092608.2-201ENST00000624427 218 ntBASIC1.62□□□□□ -2.15
RPL39P62891 MIR1291-201ENST00000627649 87 ntBASIC1.62□□□□□ -2.15
RPL39P62891 AL049780.3-201ENST00000624612 1583 ntBASIC1.62□□□□□ -2.15
RPL39P62891 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPL39P62891 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RPL39P62891 AC104446.1-201ENST00000613728 1321 ntBASIC1.62□□□□□ -2.15
RPL39P62891 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPL39P62891 MIR518C-201ENST00000384822 101 ntBASIC1.61□□□□□ -2.15
RPL39P62891 AL359511.1-201ENST00000402970 211 ntBASIC1.61□□□□□ -2.15
RPL39P62891 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.61□□□□□ -2.15
RPL39P62891 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.61□□□□□ -2.15
RPL39P62891 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.61□□□□□ -2.15
RPL39P62891 RAB9AP5-201ENST00000437794 597 ntBASIC1.61□□□□□ -2.15
RPL39P62891 AL138799.3-201ENST00000438968 350 ntBASIC1.61□□□□□ -2.15
RPL39P62891 RAB9AP2-201ENST00000443911 597 ntBASIC1.61□□□□□ -2.15
RPL39P62891 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC1.61□□□□□ -2.15
RPL39P62891 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.61□□□□□ -2.15
RPL39P62891 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.61□□□□□ -2.15
RPL39P62891 AP000873.1-201ENST00000463987 400 ntBASIC1.61□□□□□ -2.15
RPL39P62891 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RPL39P62891 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.61□□□□□ -2.15
RPL39P62891 AC080014.1-201ENST00000496877 1201 ntBASIC1.61□□□□□ -2.15
RPL39P62891 AIG1P1-201ENST00000503376 148 ntBASIC1.61□□□□□ -2.15
RPL39P62891 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms