Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.4□□□□□ -1.87
RPS4XP62701 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.4□□□□□ -1.87
RPS4XP62701 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.4□□□□□ -1.87
RPS4XP62701 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 AC015688.2-201ENST00000584523 262 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 AL669831.4-202ENST00000590817 238 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 BNIP3P40-201ENST00000596017 556 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 RNU4-5P-201ENST00000607255 135 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.4□□□□□ -1.87
RPS4XP62701 AP001521.1-201ENST00000609150 300 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RPS4XP62701 AC006213.4-201ENST00000616184 634 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 AC231759.1-201ENST00000616455 597 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 AC073968.1-201ENST00000618594 637 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 FP236240.3-201ENST00000623061 327 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 CR381572.1-201ENST00000625098 102 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 AC012442.3-202ENST00000636742 206 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RPS4XP62701 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RPS4XP62701 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPS4XP62701 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPS4XP62701 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.4□□□□□ -1.87
RPS4XP62701 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS4XP62701 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.4□□□□□ -1.87
RPS4XP62701 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPS4XP62701 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RPS4XP62701 MTND4P10-201ENST00000446199 1363 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPS4XP62701 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.39□□□□□ -1.87
RPS4XP62701 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPS4XP62701 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RPS4XP62701 Y_RNA.25-201ENST00000362528 102 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 RNA5SP124-201ENST00000362739 110 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.39□□□□□ -1.87
RPS4XP62701 RNU6-761P-201ENST00000384148 107 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 Y_RNA.493-201ENST00000384422 102 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RPS4XP62701 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 AL121972.1-201ENST00000402023 252 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 RNU6-584P-201ENST00000410350 95 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 RNU4-22P-201ENST00000411058 166 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AL161449.1-201ENST00000414531 1199 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 CRYBB2P1-203ENST00000415709 538 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 FNDC3CP-201ENST00000420795 1155 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 AC127537.2-201ENST00000439258 465 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS4XP62701 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS4XP62701 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.39□□□□□ -1.87
RPS4XP62701 ZNF886P-201ENST00000450781 723 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 NANOGP10-201ENST00000453325 895 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 AC134050.1-201ENST00000495088 933 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC108078.3-201ENST00000502633 489 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 TRAV31-201ENST00000502780 342 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC114322.1-201ENST00000506771 926 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS4XP62701 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS4XP62701 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 SCARNA14-201ENST00000516903 136 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS4XP62701 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.39□□□□□ -1.87
RPS4XP62701 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 AC125611.1-201ENST00000549563 229 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 MTND1P8-201ENST00000571424 950 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 DPRXP5-201ENST00000604662 539 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC016877.3-201ENST00000606778 504 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AL391497.1-201ENST00000608671 547 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AL121772.2-201ENST00000614331 297 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS4XP62701 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPS4XP62701 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.39□□□□□ -1.87
RPS4XP62701 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPS4XP62701 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPS4XP62701 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.39□□□□□ -1.87
RPS4XP62701 AC107982.1-201ENST00000507171 1300 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RPS4XP62701 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS4XP62701 AC006504.1-201ENST00000562493 3666 ntBASIC3.39□□□□□ -1.87
RPS4XP62701 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS4XP62701 AL157700.1-201ENST00000561973 1432 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPS4XP62701 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPS4XP62701 RNU6-216P-201ENST00000363282 104 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 RNA5SP167-201ENST00000365461 116 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 SNORA70.4-201ENST00000365509 134 ntBASIC3.38□□□□□ -1.87
RPS4XP62701 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPS4XP62701 RNU6-413P-201ENST00000384115 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms