Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.45□□□□□ -1.7
CLRN1P58418 AL121612.2-201ENST00000612261 482 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.45□□□□□ -1.7
CLRN1P58418 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLRN1P58418 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 AC009161.2-201ENST00000624626 138 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.45□□□□□ -1.7
CLRN1P58418 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 THAP12P4-201ENST00000528321 2266 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CLRN1P58418 SNURFL-201ENST00000309296 343 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 Y_RNA.11-201ENST00000362375 109 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 SNORD56.2-201ENST00000363242 71 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLRN1P58418 RNU6-761P-201ENST00000384148 107 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 RNU6-146P-201ENST00000384602 108 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 U3.20-201ENST00000390909 217 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 RPS4XP8-201ENST00000402039 771 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AC004987.3-201ENST00000413879 771 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.44□□□□□ -1.7
CLRN1P58418 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 RPL12P34-201ENST00000424532 479 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 RPL7AP61-201ENST00000443410 636 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 AL591623.2-201ENST00000449978 222 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AC022364.2-201ENST00000457963 554 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AC021382.1-201ENST00000483523 359 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 MTCO1P35-201ENST00000515270 228 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 RN7SKP66-201ENST00000516681 231 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.44□□□□□ -1.7
CLRN1P58418 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.44□□□□□ -1.7
CLRN1P58418 AL117336.2-201ENST00000602435 335 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AC068790.3-201ENST00000602988 553 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 YWHAQP7-201ENST00000603536 658 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AC025449.1-201ENST00000603896 529 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 AL445222.1-201ENST00000607259 628 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 MIR6862-1-201ENST00000613016 70 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 MIR6862-2-201ENST00000614755 70 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 AL356585.4-201ENST00000623078 1229 ntBASIC4.44□□□□□ -1.7
CLRN1P58418 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLRN1P58418 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLRN1P58418 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLRN1P58418 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CLRN1P58418 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.44□□□□□ -1.7
CLRN1P58418 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CLRN1P58418 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 OR52B1P-201ENST00000316506 909 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLRN1P58418 RNY1P12-201ENST00000364251 105 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 Y_RNA.548-201ENST00000384656 105 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLRN1P58418 ENSAP1-201ENST00000392855 326 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.43□□□□□ -1.7
CLRN1P58418 RNU2-15P-201ENST00000410692 191 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC127526.1-201ENST00000417526 366 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 ELOCP4-201ENST00000420090 333 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC069213.2-201ENST00000420238 366 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AL353597.2-202ENST00000434901 373 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AL450023.3-201ENST00000440592 271 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC010733.1-201ENST00000451515 401 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC104308.1-201ENST00000454621 333 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AL356981.1-201ENST00000454879 684 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.43□□□□□ -1.7
CLRN1P58418 RPS4XP10-201ENST00000465034 731 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 RN7SL799P-201ENST00000475891 298 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.43□□□□□ -1.7
CLRN1P58418 RNA5SP92-201ENST00000516437 110 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 RNA5SP337-201ENST00000517007 109 ntBASIC4.43□□□□□ -1.7
CLRN1P58418 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.43□□□□□ -1.7
CLRN1P58418 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms