Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN20P56880 MAGOH2P-202ENST00000584384 429 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN20P56880 AL590229.1-201ENST00000603497 542 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AP003117.2-201ENST00000606010 545 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC064807.4-201ENST00000607201 407 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC080013.4-201ENST00000607624 649 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN20P56880 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN20P56880 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN20P56880 AC000123.2-201ENST00000623124 461 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC019278.1-201ENST00000623516 479 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 AC004777.1-201ENST00000624317 287 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 CYP3A51P-201ENST00000633513 256 ntBASIC3.82□□□□□ -1.8
CLDN20P56880 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN20P56880 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN20P56880 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CLDN20P56880 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN20P56880 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN20P56880 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLDN20P56880 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 MTCO1P23-201ENST00000415223 1526 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN20P56880 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CLDN20P56880 AL121657.1-201ENST00000327215 531 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 RNU6-374P-201ENST00000364146 108 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 AL121972.1-201ENST00000402023 252 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 AC083875.1-201ENST00000419509 405 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN20P56880 Z99497.1-201ENST00000421282 135 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 OR51AB1P-201ENST00000429046 620 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 PSMA2P3-201ENST00000429685 675 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 COX6B1P7-201ENST00000430845 235 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 BTF3P10-201ENST00000433415 495 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN20P56880 RPL23AP89-201ENST00000439324 255 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN20P56880 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN20P56880 EEF1E1P1-201ENST00000446998 430 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 ARPC3P2-201ENST00000457786 533 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 RPL31P3-201ENST00000458430 332 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 PABPC1P3-201ENST00000469174 459 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 RPS29P19-201ENST00000479709 171 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AC090453.1-201ENST00000495560 436 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AC093767.1-201ENST00000504523 156 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN20P56880 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN20P56880 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN20P56880 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN20P56880 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN20P56880 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN20P56880 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN20P56880 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CLDN20P56880 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN20P56880 AC025884.1-201ENST00000556034 378 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN20P56880 AC136618.2-201ENST00000575091 400 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN20P56880 MIR5186-201ENST00000577504 120 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 MIR4458-201ENST00000578872 75 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN20P56880 AC015726.1-201ENST00000602353 681 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 WISP1-OT1-201ENST00000602893 642 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 RPL23AP92-201ENST00000603609 255 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AL139286.1-201ENST00000604465 483 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AC115621.1-201ENST00000604653 858 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 OR2AS2P-201ENST00000606902 342 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AC025588.4-201ENST00000615802 908 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AC008443.7-201ENST00000622195 246 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 AC073530.2-201ENST00000623987 261 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 MIR6715B-201ENST00000637172 77 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
CLDN20P56880 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN20P56880 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN20P56880 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN20P56880 CR381670.1-201ENST00000624291 1693 ntBASIC3.81□□□□□ -1.8
CLDN20P56880 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 AC009951.1-201ENST00000623674 2614 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 RNU6-1279P-201ENST00000383917 103 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 RNU6-723P-201ENST00000383973 107 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms