Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PRRC2CP1-201ENST00000404428 159 ntBASIC3.7□□□□□ -1.82
PEX3P56589 RNU6-584P-201ENST00000410350 95 ntBASIC3.7□□□□□ -1.82
PEX3P56589 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PEX3P56589 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 MTND4P3-201ENST00000417829 541 ntBASIC3.7□□□□□ -1.82
PEX3P56589 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.7□□□□□ -1.82
PEX3P56589 RPL30P3-201ENST00000424262 333 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 AC023347.2-201ENST00000433994 462 ntBASIC3.7□□□□□ -1.82
PEX3P56589 OR10R1P-201ENST00000441524 1141 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.7□□□□□ -1.82
PEX3P56589 HMGB1P48-201ENST00000446155 598 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AL606517.1-201ENST00000446914 387 ntBASIC3.7□□□□□ -1.82
PEX3P56589 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.7□□□□□ -1.82
PEX3P56589 AL031313.1-201ENST00000448435 256 ntBASIC3.7□□□□□ -1.82
PEX3P56589 EXOSC3P1-201ENST00000448649 500 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AL009048.1-201ENST00000450437 298 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 PLGLA-201ENST00000465668 449 ntBASIC3.7□□□□□ -1.82
PEX3P56589 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PEX3P56589 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.7□□□□□ -1.82
PEX3P56589 PCBP2P3-201ENST00000509726 843 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC110760.3-202ENST00000515177 371 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.7□□□□□ -1.82
PEX3P56589 RN7SKP116-201ENST00000516902 319 ntBASIC3.7□□□□□ -1.82
PEX3P56589 snoZ278.1-201ENST00000517059 112 ntBASIC3.7□□□□□ -1.82
PEX3P56589 HIGD1AP6-201ENST00000521833 279 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.7□□□□□ -1.82
PEX3P56589 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.7□□□□□ -1.82
PEX3P56589 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.7□□□□□ -1.82
PEX3P56589 MTND1P8-201ENST00000571424 950 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.7□□□□□ -1.82
PEX3P56589 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.7□□□□□ -1.82
PEX3P56589 AC008687.2-201ENST00000597865 520 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.7□□□□□ -1.82
PEX3P56589 AL391001.1-201ENST00000602747 715 ntBASIC3.7□□□□□ -1.82
PEX3P56589 SRGNP1-201ENST00000603392 451 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AP005137.2-201ENST00000609238 400 ntBASIC3.7□□□□□ -1.82
PEX3P56589 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.7□□□□□ -1.82
PEX3P56589 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PEX3P56589 RNU6-156P-201ENST00000621869 107 ntBASIC3.7□□□□□ -1.82
PEX3P56589 AL109659.3-201ENST00000624985 950 ntBASIC3.7□□□□□ -1.82
PEX3P56589 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.7□□□□□ -1.82
PEX3P56589 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.7□□□□□ -1.82
PEX3P56589 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.7□□□□□ -1.82
PEX3P56589 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PEX3P56589 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PEX3P56589 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
PEX3P56589 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 AC010733.2-201ENST00000589496 5702 ntBASIC3.69□□□□□ -1.82
PEX3P56589 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 SAGE4P-201ENST00000442271 3381 ntBASIC3.69□□□□□ -1.82
PEX3P56589 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 MIR34B-201ENST00000385076 84 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.69□□□□□ -1.82
PEX3P56589 RNU2-21P-201ENST00000410368 188 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AL356968.1-201ENST00000416622 474 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AL449283.1-202ENST00000418249 604 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AL513174.1-201ENST00000423182 629 ntBASIC3.69□□□□□ -1.82
PEX3P56589 RPF2P1-201ENST00000424137 906 ntBASIC3.69□□□□□ -1.82
PEX3P56589 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 AC233982.1-201ENST00000451247 436 ntBASIC3.69□□□□□ -1.82
PEX3P56589 RPL12P26-201ENST00000452430 487 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.69□□□□□ -1.82
PEX3P56589 AP000893.1-201ENST00000474462 794 ntBASIC3.69□□□□□ -1.82
PEX3P56589 GAPDHP39-201ENST00000481866 979 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AC011037.1-201ENST00000483964 558 ntBASIC3.69□□□□□ -1.82
PEX3P56589 RPL21P13-201ENST00000488305 481 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AC021678.1-201ENST00000505195 936 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 AC118282.2-201ENST00000508739 374 ntBASIC3.69□□□□□ -1.82
PEX3P56589 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 APOOP4-201ENST00000513530 597 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.69□□□□□ -1.82
PEX3P56589 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.69□□□□□ -1.82
PEX3P56589 BPTFP1-201ENST00000579209 492 ntBASIC3.69□□□□□ -1.82
PEX3P56589 MIR3944-201ENST00000581277 108 ntBASIC3.69□□□□□ -1.82
PEX3P56589 MIR4512-201ENST00000583257 77 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PEX3P56589 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.69□□□□□ -1.82
PEX3P56589 AC091488.1-201ENST00000604239 660 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AL392112.1-201ENST00000605115 829 ntBASIC3.69□□□□□ -1.82
PEX3P56589 AP000238.1-201ENST00000608759 426 ntBASIC3.69□□□□□ -1.82
PEX3P56589 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PEX3P56589 VN1R74P-201ENST00000613259 503 ntBASIC3.69□□□□□ -1.82
PEX3P56589 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms