Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNORD56.6-201ENST00000384569 71 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 RPL32P23-201ENST00000397237 405 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 DBIP1-201ENST00000401435 260 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AL109755.1-201ENST00000401791 649 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 TXNP7-201ENST00000406296 293 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AL606923.1-201ENST00000406616 190 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.87□□□□□ -1.63
GFRA1P56159 MTND3P8-201ENST00000412909 339 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 CHEK2P3-201ENST00000416118 248 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AL354868.1-201ENST00000417077 482 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.87□□□□□ -1.63
GFRA1P56159 AL161631.1-201ENST00000417933 486 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 IFNA20P-201ENST00000436840 528 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.87□□□□□ -1.63
GFRA1P56159 MTND6P18-201ENST00000439477 513 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC073465.2-201ENST00000440938 498 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 SNORD97-201ENST00000459187 142 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC007547.1-201ENST00000462177 490 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 RN7SL189P-201ENST00000468631 289 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 RPL7L1P8-201ENST00000469911 741 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.87□□□□□ -1.63
GFRA1P56159 RN7SL30P-201ENST00000488416 306 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AC103851.1-201ENST00000506833 274 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AC091912.1-201ENST00000511351 248 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 Y_RNA.701-201ENST00000516812 110 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC103783.1-201ENST00000520506 373 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 SUMO2P20-201ENST00000520803 283 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AP004607.2-201ENST00000533949 322 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC093027.1-201ENST00000546698 429 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 NCAPGP2-201ENST00000557911 754 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.87□□□□□ -1.63
GFRA1P56159 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA1P56159 AP000769.2-201ENST00000602344 396 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC078795.3-201ENST00000602913 472 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC006254.3-201ENST00000603353 884 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC087763.1-201ENST00000603391 286 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AL139124.1-201ENST00000609123 421 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 CYP4F35P-202ENST00000636121 390 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 U6.114-201ENST00000636407 96 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC074101.1-201ENST00000637861 241 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 MIR1302-1-201ENST00000637932 143 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 MTND4P35-201ENST00000604257 1375 ntBASIC4.87□□□□□ -1.63
GFRA1P56159 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GFRA1P56159 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA1P56159 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA1P56159 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 RNU6-552P-201ENST00000362869 119 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 SNORA67-201ENST00000384423 137 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
GFRA1P56159 RNU6-754P-201ENST00000391166 107 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 OR4K12P-201ENST00000406538 961 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 RNU4-26P-201ENST00000410270 107 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 RNU2-36P-201ENST00000410361 191 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 RNU2-29P-201ENST00000410423 189 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 RN7SKP159-201ENST00000410657 292 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC005517.2-201ENST00000424673 553 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.86□□□□□ -1.63
GFRA1P56159 RPL36AP6-201ENST00000435770 321 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC005094.1-201ENST00000440420 368 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 PPIAP3-201ENST00000450588 505 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.86□□□□□ -1.63
GFRA1P56159 RN7SL172P-201ENST00000460535 303 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 HMGB1P25-201ENST00000468402 607 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC092754.1-201ENST00000472975 479 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 RN7SL727P-201ENST00000482164 296 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms