Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TMED11P-201ENST00000479478 690 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 RPL9P33-201ENST00000484311 566 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 RPL32P9-201ENST00000487963 407 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AC055855.1-201ENST00000489563 579 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 SCARNA22-201ENST00000503991 125 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.35□□□□□ -1.71
SUMO3P55854 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.35□□□□□ -1.71
SUMO3P55854 MTND1P5-201ENST00000517906 940 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.35□□□□□ -1.71
SUMO3P55854 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.35□□□□□ -1.71
SUMO3P55854 AP003181.2-201ENST00000528941 181 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.35□□□□□ -1.71
SUMO3P55854 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.35□□□□□ -1.71
SUMO3P55854 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.35□□□□□ -1.71
SUMO3P55854 AC051619.2-201ENST00000559063 397 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.35□□□□□ -1.71
SUMO3P55854 AL356432.3-201ENST00000568952 465 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 MIR3934-201ENST00000579806 107 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.35□□□□□ -1.71
SUMO3P55854 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.35□□□□□ -1.71
SUMO3P55854 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.35□□□□□ -1.71
SUMO3P55854 AC068790.3-201ENST00000602988 553 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 DUXAP4-201ENST00000603046 613 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AL161729.4-201ENST00000604650 476 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AL391358.1-201ENST00000605342 190 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SUMO3P55854 MIR8069-1-201ENST00000616627 86 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AC090510.2-201ENST00000617465 629 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 MIR8069-2-201ENST00000621412 86 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AL161637.1-201ENST00000622380 412 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SUMO3P55854 AC110994.2-201ENST00000635481 492 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 AC099654.12-201ENST00000639868 649 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SUMO3P55854 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SUMO3P55854 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SUMO3P55854 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SUMO3P55854 AL022393.1-201ENST00000625142 1677 ntBASIC4.35□□□□□ -1.71
SUMO3P55854 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SUMO3P55854 AL731566.1-201ENST00000620490 1937 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SUMO3P55854 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SUMO3P55854 IRF5P1-201ENST00000504852 2164 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SUMO3P55854 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SUMO3P55854 Y_RNA.6-201ENST00000362350 114 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 RNU6-1279P-201ENST00000383917 103 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SUMO3P55854 CCNG1P1-201ENST00000406783 885 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AL583834.1-201ENST00000406943 343 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.34□□□□□ -1.71
SUMO3P55854 MTND1P21-201ENST00000412991 285 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.34□□□□□ -1.71
SUMO3P55854 E2F6P2-201ENST00000420708 748 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AL645608.4-201ENST00000423619 154 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AC233728.2-201ENST00000425348 757 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.34□□□□□ -1.71
SUMO3P55854 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.34□□□□□ -1.71
SUMO3P55854 C8orf59P1-201ENST00000429930 303 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.34□□□□□ -1.71
SUMO3P55854 DNAJC19P4-201ENST00000440115 345 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.34□□□□□ -1.71
SUMO3P55854 RPS3AP41-201ENST00000462701 778 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AC007686.1-201ENST00000488511 463 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.34□□□□□ -1.71
SUMO3P55854 AC091133.4-201ENST00000511142 308 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 RNU6-528P-201ENST00000516926 100 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 RNU6-430P-201ENST00000517078 107 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.34□□□□□ -1.71
SUMO3P55854 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.34□□□□□ -1.71
SUMO3P55854 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.34□□□□□ -1.71
SUMO3P55854 AC090616.5-202ENST00000582111 297 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 AP003465.2-201ENST00000602571 373 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.34□□□□□ -1.71
SUMO3P55854 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.34□□□□□ -1.71
SUMO3P55854 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.34□□□□□ -1.71
SUMO3P55854 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SUMO3P55854 AL731532.2-201ENST00000623542 1953 ntBASIC4.34□□□□□ -1.71
SUMO3P55854 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.34□□□□□ -1.71
SUMO3P55854 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.34□□□□□ -1.72
SUMO3P55854 AL672167.1-204ENST00000641875 3017 ntBASIC4.34□□□□□ -1.72
SUMO3P55854 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SUMO3P55854 AC006971.1-201ENST00000407916 4486 ntBASIC4.34□□□□□ -1.72
SUMO3P55854 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.33□□□□□ -1.72
SUMO3P55854 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SUMO3P55854 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 AC125257.1-201ENST00000560400 2930 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms