Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH13P55290 AC244205.2-202ENST00000635781 342 ntBASIC3.82□□□□□ -1.8
CDH13P55290 MTND2P41-201ENST00000637599 773 ntBASIC3.82□□□□□ -1.8
CDH13P55290 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH13P55290 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH13P55290 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
CDH13P55290 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH13P55290 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH13P55290 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH13P55290 RNU6-989P-201ENST00000362756 107 ntBASIC3.81□□□□□ -1.8
CDH13P55290 RNU6-757P-201ENST00000410334 100 ntBASIC3.81□□□□□ -1.8
CDH13P55290 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH13P55290 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH13P55290 EI24P1-201ENST00000416584 867 ntBASIC3.81□□□□□ -1.8
CDH13P55290 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH13P55290 RPL18P10-201ENST00000425606 538 ntBASIC3.81□□□□□ -1.8
CDH13P55290 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH13P55290 AL365396.1-201ENST00000430854 671 ntBASIC3.81□□□□□ -1.8
CDH13P55290 RPS25P9-201ENST00000435591 252 ntBASIC3.81□□□□□ -1.8
CDH13P55290 RSL24D1P3-201ENST00000449255 495 ntBASIC3.81□□□□□ -1.8
CDH13P55290 MTCO3P11-201ENST00000455103 774 ntBASIC3.81□□□□□ -1.8
CDH13P55290 SUMO2P2-201ENST00000456482 255 ntBASIC3.81□□□□□ -1.8
CDH13P55290 snoU109.4-201ENST00000458953 143 ntBASIC3.81□□□□□ -1.8
CDH13P55290 AC097493.1-201ENST00000463958 372 ntBASIC3.81□□□□□ -1.8
CDH13P55290 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH13P55290 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH13P55290 IGHV3-32-201ENST00000519182 355 ntBASIC3.81□□□□□ -1.8
CDH13P55290 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH13P55290 DEFB131D-201ENST00000526803 184 ntBASIC3.81□□□□□ -1.8
CDH13P55290 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH13P55290 TOMM20P2-201ENST00000540082 421 ntBASIC3.81□□□□□ -1.8
CDH13P55290 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH13P55290 KPNA2P3-201ENST00000584190 848 ntBASIC3.81□□□□□ -1.8
CDH13P55290 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH13P55290 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH13P55290 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH13P55290 AC112220.3-201ENST00000605502 502 ntBASIC3.81□□□□□ -1.8
CDH13P55290 BRDTP1-201ENST00000605735 677 ntBASIC3.81□□□□□ -1.8
CDH13P55290 HMGN2P28-201ENST00000606102 262 ntBASIC3.81□□□□□ -1.8
CDH13P55290 MIR6748-201ENST00000610433 71 ntBASIC3.81□□□□□ -1.8
CDH13P55290 AC005962.2-201ENST00000611427 652 ntBASIC3.81□□□□□ -1.8
CDH13P55290 AC006329.2-201ENST00000611491 394 ntBASIC3.81□□□□□ -1.8
CDH13P55290 MIR7641-1-201ENST00000627518 61 ntBASIC3.81□□□□□ -1.8
CDH13P55290 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH13P55290 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH13P55290 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH13P55290 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CDH13P55290 MTND5P24-201ENST00000438892 1767 ntBASIC3.81□□□□□ -1.8
CDH13P55290 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
CDH13P55290 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 AP002907.1-201ENST00000606361 1430 ntBASIC3.8□□□□□ -1.8
CDH13P55290 OR4G11P-202ENST00000642116 1414 ntBASIC3.8□□□□□ -1.8
CDH13P55290 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
CDH13P55290 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.8□□□□□ -1.8
CDH13P55290 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDH13P55290 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDH13P55290 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 SNORA56-201ENST00000383966 129 ntBASIC3.8□□□□□ -1.8
CDH13P55290 HMGN2P8-201ENST00000391458 268 ntBASIC3.8□□□□□ -1.8
CDH13P55290 RPL23AP29-201ENST00000397284 453 ntBASIC3.8□□□□□ -1.8
CDH13P55290 RNU4-6P-201ENST00000410804 122 ntBASIC3.8□□□□□ -1.8
CDH13P55290 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 MTCYBP38-201ENST00000417160 1123 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 ARPC3P5-201ENST00000448802 534 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 AL445669.2-201ENST00000454425 421 ntBASIC3.8□□□□□ -1.8
CDH13P55290 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
CDH13P55290 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDH13P55290 TMEM251P1-201ENST00000503717 318 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC004069.2-201ENST00000505438 1114 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 SNORA31.9-201ENST00000516429 84 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 RAB9BP1-201ENST00000519581 626 ntBASIC3.8□□□□□ -1.8
CDH13P55290 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 AC087369.1-201ENST00000520775 996 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 AC092851.1-201ENST00000535964 478 ntBASIC3.8□□□□□ -1.8
CDH13P55290 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 YPEL5P3-201ENST00000547227 352 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 AC090877.1-201ENST00000561418 344 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH13P55290 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH13P55290 AC023575.1-201ENST00000580510 358 ntBASIC3.8□□□□□ -1.8
CDH13P55290 MIR3939-201ENST00000582614 106 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC103881.1-201ENST00000603476 538 ntBASIC3.8□□□□□ -1.8
CDH13P55290 BNIP3P11-201ENST00000603878 563 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms