Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH6P55285 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.36□□□□□ -1.87
CDH6P55285 PRDX3P3-201ENST00000447765 522 ntBASIC3.36□□□□□ -1.87
CDH6P55285 RPL21P104-201ENST00000464143 478 ntBASIC3.36□□□□□ -1.87
CDH6P55285 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH6P55285 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH6P55285 WBP1LP4-201ENST00000505043 344 ntBASIC3.36□□□□□ -1.87
CDH6P55285 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH6P55285 SNORA76.2-201ENST00000517095 137 ntBASIC3.36□□□□□ -1.87
CDH6P55285 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH6P55285 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH6P55285 AL845331.3-202ENST00000562856 261 ntBASIC3.36□□□□□ -1.87
CDH6P55285 AC095057.3-201ENST00000567102 1157 ntBASIC3.36□□□□□ -1.87
CDH6P55285 RN7SL339P-201ENST00000580597 296 ntBASIC3.36□□□□□ -1.87
CDH6P55285 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CDH6P55285 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH6P55285 ELOCP35-201ENST00000604289 336 ntBASIC3.36□□□□□ -1.87
CDH6P55285 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.36□□□□□ -1.87
CDH6P55285 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH6P55285 MIR7975-201ENST00000619350 68 ntBASIC3.36□□□□□ -1.87
CDH6P55285 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH6P55285 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH6P55285 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH6P55285 MTND4P21-201ENST00000453886 1357 ntBASIC3.36□□□□□ -1.87
CDH6P55285 MTCO1P6-201ENST00000481192 1384 ntBASIC3.36□□□□□ -1.87
CDH6P55285 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH6P55285 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH6P55285 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH6P55285 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 AP001350.1-201ENST00000601906 1524 ntBASIC3.35□□□□□ -1.87
CDH6P55285 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH6P55285 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 RPL23AP47-201ENST00000408017 460 ntBASIC3.35□□□□□ -1.87
CDH6P55285 RNU2-71P-201ENST00000411395 189 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC006960.1-201ENST00000419980 153 ntBASIC3.35□□□□□ -1.87
CDH6P55285 YME1L1P1-201ENST00000429435 297 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 AC010881.1-201ENST00000433830 235 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 AC092170.1-201ENST00000440211 356 ntBASIC3.35□□□□□ -1.87
CDH6P55285 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH6P55285 TXNP1-201ENST00000441872 371 ntBASIC3.35□□□□□ -1.87
CDH6P55285 RAB11AP1-201ENST00000442978 646 ntBASIC3.35□□□□□ -1.87
CDH6P55285 RNFT1P2-201ENST00000443064 757 ntBASIC3.35□□□□□ -1.87
CDH6P55285 ELOCP13-201ENST00000443934 329 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 RPS15AP1-201ENST00000457423 391 ntBASIC3.35□□□□□ -1.87
CDH6P55285 OR5H3P-201ENST00000502817 919 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC110794.1-201ENST00000505816 425 ntBASIC3.35□□□□□ -1.87
CDH6P55285 MTND4LP22-201ENST00000508209 276 ntBASIC3.35□□□□□ -1.87
CDH6P55285 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
CDH6P55285 RNU6-362P-201ENST00000516736 90 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 HIGD1AP6-201ENST00000521833 279 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AP004371.1-201ENST00000525240 214 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH6P55285 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH6P55285 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 AL163153.1-201ENST00000554223 283 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC104229.1-201ENST00000561364 255 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH6P55285 AC106734.1-201ENST00000568646 663 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC011492.1-201ENST00000600023 315 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AC009464.1-201ENST00000615731 469 ntBASIC3.35□□□□□ -1.87
CDH6P55285 RMST_10.1-201ENST00000616309 154 ntBASIC3.35□□□□□ -1.87
CDH6P55285 AL118508.4-201ENST00000624142 1176 ntBASIC3.35□□□□□ -1.87
CDH6P55285 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH6P55285 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH6P55285 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CDH6P55285 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH6P55285 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH6P55285 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
CDH6P55285 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH6P55285 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH6P55285 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.34□□□□□ -1.87
CDH6P55285 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CDH6P55285 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH6P55285 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH6P55285 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH6P55285 RNA5SP72-201ENST00000364442 117 ntBASIC3.34□□□□□ -1.87
CDH6P55285 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH6P55285 RNU6-444P-201ENST00000383988 108 ntBASIC3.34□□□□□ -1.87
CDH6P55285 RNU6-837P-201ENST00000391056 108 ntBASIC3.34□□□□□ -1.87
CDH6P55285 TAF9BP1-201ENST00000396646 746 ntBASIC3.34□□□□□ -1.87
CDH6P55285 TOMM22P1-201ENST00000418578 312 ntBASIC3.34□□□□□ -1.87
CDH6P55285 PAICSP7-201ENST00000419829 962 ntBASIC3.34□□□□□ -1.87
CDH6P55285 GTF2IP23-201ENST00000423746 351 ntBASIC3.34□□□□□ -1.87
CDH6P55285 VN1R42P-201ENST00000424651 344 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH6P55285 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH6P55285 snoU13.3-201ENST00000459441 104 ntBASIC3.34□□□□□ -1.87
CDH6P55285 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH6P55285 AC012181.1-201ENST00000479895 423 ntBASIC3.34□□□□□ -1.87
CDH6P55285 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH6P55285 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.34□□□□□ -1.87
CDH6P55285 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH6P55285 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH6P55285 AC104057.1-201ENST00000515547 497 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms