Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPAP53621 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPAP53621 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COPAP53621 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPAP53621 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPAP53621 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COPAP53621 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.57□□□□□ -1.68
COPAP53621 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPAP53621 AC007685.1-201ENST00000329806 452 ntBASIC4.57□□□□□ -1.68
COPAP53621 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPAP53621 RNU5F-7P-201ENST00000363696 115 ntBASIC4.57□□□□□ -1.68
COPAP53621 RNA5SP167-201ENST00000365461 116 ntBASIC4.57□□□□□ -1.68
COPAP53621 MIR3074-201ENST00000384885 81 ntBASIC4.57□□□□□ -1.68
COPAP53621 MIR320C1-201ENST00000408566 88 ntBASIC4.57□□□□□ -1.68
COPAP53621 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.57□□□□□ -1.68
COPAP53621 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 PSMA2P3-201ENST00000429685 675 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.57□□□□□ -1.68
COPAP53621 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.57□□□□□ -1.68
COPAP53621 USP9YP7-201ENST00000436723 430 ntBASIC4.57□□□□□ -1.68
COPAP53621 AL512286.1-201ENST00000439244 400 ntBASIC4.57□□□□□ -1.68
COPAP53621 USP9YP32-201ENST00000452432 430 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC017015.1-201ENST00000477387 286 ntBASIC4.57□□□□□ -1.68
COPAP53621 RN7SL810P-201ENST00000493031 276 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC090453.1-201ENST00000495560 436 ntBASIC4.57□□□□□ -1.68
COPAP53621 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC090151.1-201ENST00000520784 730 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.57□□□□□ -1.68
COPAP53621 AC060788.1-201ENST00000521318 469 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.57□□□□□ -1.68
COPAP53621 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.57□□□□□ -1.68
COPAP53621 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.57□□□□□ -1.68
COPAP53621 PCMTD1P2-201ENST00000565017 355 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC006362.1-201ENST00000567392 174 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.57□□□□□ -1.68
COPAP53621 AC141257.3-201ENST00000572906 215 ntBASIC4.57□□□□□ -1.68
COPAP53621 AP001004.1-201ENST00000582468 324 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC008759.1-201ENST00000589783 983 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC022146.1-201ENST00000595307 847 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC080013.4-201ENST00000607624 649 ntBASIC4.57□□□□□ -1.68
COPAP53621 AP000254.1-201ENST00000609934 520 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC013562.2-201ENST00000611632 603 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC026368.1-201ENST00000614934 690 ntBASIC4.57□□□□□ -1.68
COPAP53621 AC025588.4-201ENST00000615802 908 ntBASIC4.57□□□□□ -1.68
COPAP53621 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COPAP53621 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPAP53621 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPAP53621 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.57□□□□□ -1.68
COPAP53621 MTCO1P23-201ENST00000415223 1526 ntBASIC4.56□□□□□ -1.68
COPAP53621 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.56□□□□□ -1.68
COPAP53621 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 RNU6-501P-201ENST00000364072 100 ntBASIC4.56□□□□□ -1.68
COPAP53621 RNVU1-3-201ENST00000364313 161 ntBASIC4.56□□□□□ -1.68
COPAP53621 SNORD82-201ENST00000365530 70 ntBASIC4.56□□□□□ -1.68
COPAP53621 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 PGBD4P8-201ENST00000412993 562 ntBASIC4.56□□□□□ -1.68
COPAP53621 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 RPL31P2-201ENST00000413849 377 ntBASIC4.56□□□□□ -1.68
COPAP53621 FNDC3CP-201ENST00000420795 1155 ntBASIC4.56□□□□□ -1.68
COPAP53621 MTCO2P34-201ENST00000421994 607 ntBASIC4.56□□□□□ -1.68
COPAP53621 LARP1BP3-201ENST00000437229 869 ntBASIC4.56□□□□□ -1.68
COPAP53621 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.56□□□□□ -1.68
COPAP53621 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 VN1R32P-201ENST00000452234 905 ntBASIC4.56□□□□□ -1.68
COPAP53621 USP9YP34-201ENST00000453983 808 ntBASIC4.56□□□□□ -1.68
COPAP53621 SNRPGP9-201ENST00000456025 225 ntBASIC4.56□□□□□ -1.68
COPAP53621 PABPC1P3-201ENST00000469174 459 ntBASIC4.56□□□□□ -1.68
COPAP53621 AC020593.1-201ENST00000507399 299 ntBASIC4.56□□□□□ -1.68
COPAP53621 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 PTGES3P3-201ENST00000511479 482 ntBASIC4.56□□□□□ -1.68
COPAP53621 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.56□□□□□ -1.68
COPAP53621 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
COPAP53621 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 AC022861.1-201ENST00000522981 663 ntBASIC4.56□□□□□ -1.68
COPAP53621 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.56□□□□□ -1.68
COPAP53621 HSPA8P13-201ENST00000523715 472 ntBASIC4.56□□□□□ -1.68
COPAP53621 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 AP003033.1-201ENST00000527244 415 ntBASIC4.56□□□□□ -1.68
COPAP53621 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 GTF2IP22-201ENST00000554443 182 ntBASIC4.56□□□□□ -1.68
COPAP53621 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.56□□□□□ -1.68
COPAP53621 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms