Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 Z84480.1-201ENST00000605131 311 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL627309.6-201ENST00000606857 840 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL391813.2-201ENST00000609113 322 ntBASIC5.79□□□□□ -1.48
USP11P51784 AC093799.2-201ENST00000610062 578 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL355472.4-201ENST00000610233 626 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL442067.1-201ENST00000613261 223 ntBASIC5.79□□□□□ -1.48
USP11P51784 MIR7155-201ENST00000615925 56 ntBASIC5.79□□□□□ -1.48
USP11P51784 AL354950.2-201ENST00000617939 290 ntBASIC5.79□□□□□ -1.48
USP11P51784 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.79□□□□□ -1.48
USP11P51784 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
USP11P51784 MTND4LP32-201ENST00000636111 270 ntBASIC5.79□□□□□ -1.48
USP11P51784 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.79□□□□□ -1.48
USP11P51784 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP11P51784 AP002907.1-201ENST00000606361 1430 ntBASIC5.79□□□□□ -1.48
USP11P51784 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP11P51784 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP11P51784 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
USP11P51784 AC011755.1-201ENST00000623763 2049 ntBASIC5.79□□□□□ -1.48
USP11P51784 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.79□□□□□ -1.48
USP11P51784 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP11P51784 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.78□□□□□ -1.48
USP11P51784 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.78□□□□□ -1.48
USP11P51784 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.78□□□□□ -1.48
USP11P51784 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
USP11P51784 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 Y_RNA.31-201ENST00000362574 102 ntBASIC5.78□□□□□ -1.48
USP11P51784 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 SNORA70-201ENST00000384436 135 ntBASIC5.78□□□□□ -1.48
USP11P51784 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.78□□□□□ -1.48
USP11P51784 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.78□□□□□ -1.48
USP11P51784 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.78□□□□□ -1.48
USP11P51784 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 AC009161.1-201ENST00000417306 376 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC093162.1-201ENST00000419682 124 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC006020.1-201ENST00000420179 1854 ntBASIC5.78□□□□□ -1.48
USP11P51784 DUTP6-201ENST00000425573 462 ntBASIC5.78□□□□□ -1.48
USP11P51784 RBMY2QP-201ENST00000429799 1147 ntBASIC5.78□□□□□ -1.48
USP11P51784 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.78□□□□□ -1.48
USP11P51784 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.78□□□□□ -1.48
USP11P51784 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.78□□□□□ -1.48
USP11P51784 AL591623.2-201ENST00000449978 222 ntBASIC5.78□□□□□ -1.48
USP11P51784 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.78□□□□□ -1.48
USP11P51784 HMGN2P26-201ENST00000463169 339 ntBASIC5.78□□□□□ -1.48
USP11P51784 RPL21P71-201ENST00000465598 459 ntBASIC5.78□□□□□ -1.48
USP11P51784 RPL5P22-201ENST00000480199 884 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC004453.1-201ENST00000487895 408 ntBASIC5.78□□□□□ -1.48
USP11P51784 UBA52P3-201ENST00000491303 382 ntBASIC5.78□□□□□ -1.48
USP11P51784 TMEM251P1-201ENST00000503717 318 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.78□□□□□ -1.48
USP11P51784 AC010587.1-201ENST00000505809 469 ntBASIC5.78□□□□□ -1.48
USP11P51784 COX6B1P5-201ENST00000509843 249 ntBASIC5.78□□□□□ -1.48
USP11P51784 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.78□□□□□ -1.48
USP11P51784 AC004980.4-201ENST00000513375 203 ntBASIC5.78□□□□□ -1.48
USP11P51784 RNU6-513P-201ENST00000516104 104 ntBASIC5.78□□□□□ -1.48
USP11P51784 Y_RNA.718-201ENST00000517110 102 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.78□□□□□ -1.48
USP11P51784 AC018630.1-201ENST00000541376 925 ntBASIC5.78□□□□□ -1.48
USP11P51784 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.78□□□□□ -1.48
USP11P51784 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.78□□□□□ -1.48
USP11P51784 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.78□□□□□ -1.48
USP11P51784 HMGB1P6-201ENST00000569046 646 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC006270.2-201ENST00000578523 652 ntBASIC5.78□□□□□ -1.48
USP11P51784 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.78□□□□□ -1.48
USP11P51784 AC011468.4-201ENST00000603942 409 ntBASIC5.78□□□□□ -1.48
USP11P51784 AL355598.1-201ENST00000604169 202 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.78□□□□□ -1.48
USP11P51784 AC068870.2-201ENST00000620635 389 ntBASIC5.78□□□□□ -1.48
USP11P51784 AC104260.2-201ENST00000623551 3497 ntBASIC5.78□□□□□ -1.48
USP11P51784 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.78□□□□□ -1.48
USP11P51784 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.78□□□□□ -1.48
USP11P51784 LARP1BP1-201ENST00000506036 1359 ntBASIC5.78□□□□□ -1.48
USP11P51784 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
USP11P51784 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP11P51784 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.48
USP11P51784 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.77□□□□□ -1.48
USP11P51784 AC012618.3-205ENST00000637896 1496 ntBASIC5.77□□□□□ -1.49
USP11P51784 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.77□□□□□ -1.49
USP11P51784 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.77□□□□□ -1.49
USP11P51784 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 AL512646.1-201ENST00000269395 1077 ntBASIC5.77□□□□□ -1.49
USP11P51784 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USP11P51784 RNU4-44P-201ENST00000363050 141 ntBASIC5.77□□□□□ -1.49
USP11P51784 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 SNORA20.2-201ENST00000383922 131 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms