Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL590762.3-201ENST00000436372 640 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 MTND4P15-201ENST00000437913 1033 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AC097499.1-201ENST00000444277 208 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 TPTE2P6-202ENST00000445572 1007 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL12P48061 RPS4XP5-202ENST00000449995 1334 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 TPMTP4-201ENST00000450749 678 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL12P48061 SNX5P1-201ENST00000505757 1041 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CXCL12P48061 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL12P48061 COL6A4P2-205ENST00000509855 506 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.06□□□□□ -1.92
CXCL12P48061 MTND2P31-201ENST00000512602 616 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.06□□□□□ -1.92
CXCL12P48061 AC093755.1-201ENST00000512950 1023 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL12P48061 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.06□□□□□ -1.92
CXCL12P48061 NARSP2-201ENST00000518524 679 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL12P48061 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL12P48061 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL12P48061 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL12P48061 AL161713.1-201ENST00000555538 145 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL12P48061 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL12P48061 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL12P48061 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL12P48061 VN1R90P-201ENST00000595717 726 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AL035413.2-201ENST00000604801 525 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AC092628.2-201ENST00000622492 339 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AC025125.1-201ENST00000624743 1922 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 AC091948.2-201ENST00000636510 279 ntBASIC3.06□□□□□ -1.92
CXCL12P48061 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CXCL12P48061 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC138393.1-206ENST00000540997 1886 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL12P48061 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.05□□□□□ -1.92
CXCL12P48061 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL12P48061 AL645568.2-201ENST00000432815 1337 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 AC062016.1-201ENST00000355719 319 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 RNA5SP432-201ENST00000362480 116 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 RPS4XP8-201ENST00000402039 771 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL12P48061 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL12P48061 AL035407.1-201ENST00000429211 571 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 ARF4P2-201ENST00000430209 526 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL12P48061 MTND2P30-201ENST00000456663 382 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.05□□□□□ -1.92
CXCL12P48061 RN7SL330P-201ENST00000469709 307 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 AC104687.1-201ENST00000485829 412 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL12P48061 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.05□□□□□ -1.92
CXCL12P48061 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC025260.1-201ENST00000548858 430 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 POLR2KP1-201ENST00000553226 168 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL12P48061 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC007687.1-201ENST00000602704 304 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 Z82195.1-201ENST00000604558 398 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 AC018618.2-201ENST00000604770 446 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 KATNBL1P5-201ENST00000605015 517 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL12P48061 AC011374.2-201ENST00000607135 526 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL12P48061 U6.48-201ENST00000618523 106 ntBASIC3.05□□□□□ -1.92
CXCL12P48061 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.05□□□□□ -1.92
CXCL12P48061 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
CXCL12P48061 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL12P48061 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL12P48061 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 AC110754.1-201ENST00000399740 601 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 AC023128.2-201ENST00000420880 1223 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 AL645937.1-202ENST00000421799 937 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC063976.3-201ENST00000426849 329 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 RPS20P5-201ENST00000434808 360 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL12P48061 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC108938.1-201ENST00000451204 136 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 MTCO3P16-201ENST00000454456 754 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC111193.1-201ENST00000504097 155 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 HIGD1AP13-201ENST00000509878 289 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL12P48061 RNU6-1102P-201ENST00000516149 96 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 RNU6-1231P-201ENST00000517185 103 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 IGKV2-36-201ENST00000519999 223 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms