Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC104164.2-201ENST00000496953 495 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-1P43699 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-1P43699 BRD9P1-201ENST00000529855 560 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AC092851.1-201ENST00000535964 478 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC006064.5-201ENST00000541782 248 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX2-1P43699 CBX3P5-201ENST00000552017 521 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-1P43699 MTCYBP33-201ENST00000575007 1130 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC011260.1-201ENST00000578420 472 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 KPNA2P3-201ENST00000584190 848 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AC040904.1-201ENST00000590850 223 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC020914.4-201ENST00000597690 277 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 WISP1-OT1-201ENST00000602893 642 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AL590229.1-201ENST00000603497 542 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC055876.5-201ENST00000605667 259 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC092653.1-201ENST00000608509 531 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC128687.2-201ENST00000609657 566 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AL445264.1-201ENST00000621719 171 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AP001784.1-201ENST00000624107 428 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC010608.2-201ENST00000624830 470 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-1P43699 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-1P43699 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-1P43699 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NKX2-1P43699 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-1P43699 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-1P43699 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-1P43699 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-1P43699 AL365440.1-201ENST00000436135 2167 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AL590240.1-201ENST00000334118 313 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 RNU6-335P-201ENST00000364563 113 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 RNA5SP88-201ENST00000365560 109 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 MIR3065-201ENST00000390137 79 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AL031679.1-201ENST00000400616 525 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 MIR298-201ENST00000401212 88 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 DHFRP6-201ENST00000401776 268 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AL583834.1-201ENST00000406943 343 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 MIR1179-201ENST00000408703 91 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 RAC1P3-201ENST00000416129 580 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AL391219.1-201ENST00000422570 483 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AL590233.1-201ENST00000430017 456 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 MTND1P20-201ENST00000430341 950 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 RPL23AP35-201ENST00000451906 501 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-1P43699 MTND4LP3-201ENST00000468320 276 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 HMGB1P25-201ENST00000468402 607 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-1P43699 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AC069499.1-201ENST00000489433 509 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC011005.3-201ENST00000491624 395 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC078918.1-201ENST00000498515 228 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AL109766.1-201ENST00000555080 552 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX2-1P43699 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-1P43699 UBE2FP2-201ENST00000566646 462 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AC006270.2-201ENST00000578523 652 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AC008782.1-201ENST00000603386 430 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AL365503.1-201ENST00000605247 905 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC135507.1-201ENST00000607214 561 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC026368.1-201ENST00000614934 690 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AL596245.1-201ENST00000618994 362 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC073530.2-201ENST00000623987 261 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 AC079228.1-201ENST00000624774 1049 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-1P43699 AC091925.2-201ENST00000625059 256 ntBASIC3.47□□□□□ -1.85
NKX2-1P43699 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms