Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HNF4AP41235 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 BDP1P-201ENST00000582658 1990 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 SPRR2C-201ENST00000290702 219 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HNF4AP41235 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HNF4AP41235 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HNF4AP41235 RNU6-492P-201ENST00000363035 104 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 SNORD116-12-201ENST00000384468 92 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 TAS2R15P-201ENST00000390674 928 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 MTND4P13-201ENST00000402078 1023 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 RPL21P65-201ENST00000406094 466 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 RNU6-712P-201ENST00000410558 100 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 RPS7P9-201ENST00000414704 586 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AL356095.1-201ENST00000417217 199 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.85□□□□□ -1.79
HNF4AP41235 MTCO2P21-201ENST00000419780 677 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 C1DP1-201ENST00000426049 402 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.85□□□□□ -1.79
HNF4AP41235 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.85□□□□□ -1.79
HNF4AP41235 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HNF4AP41235 HMGB1P37-201ENST00000439613 609 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC079203.1-201ENST00000487972 404 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC108064.1-201ENST00000513791 460 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 RNA5SP143-201ENST00000516936 115 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 SNORA48.10-201ENST00000516965 160 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 MRPS36P3-201ENST00000519284 130 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.85□□□□□ -1.79
HNF4AP41235 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.85□□□□□ -1.79
HNF4AP41235 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC087481.2-201ENST00000565492 330 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 CCDC58P3-201ENST00000590792 430 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 VIS1.1-201ENST00000610517 203 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AL121895.2-201ENST00000619558 447 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AL590240.3-201ENST00000621416 943 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AC022079.1-201ENST00000621546 602 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AC120349.3-201ENST00000624377 529 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AC087821.2-201ENST00000637086 450 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HNF4AP41235 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.85□□□□□ -1.79
HNF4AP41235 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HNF4AP41235 AC138915.3-201ENST00000562908 1389 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HNF4AP41235 AC091152.2-201ENST00000591628 2569 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 AC007256.1-201ENST00000392253 2765 ntBASIC3.85□□□□□ -1.79
HNF4AP41235 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.85□□□□□ -1.79
HNF4AP41235 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HNF4AP41235 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.84□□□□□ -1.79
HNF4AP41235 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.79
HNF4AP41235 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HNF4AP41235 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.84□□□□□ -1.79
HNF4AP41235 MIR372-201ENST00000362225 67 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 RNU4-68P-201ENST00000364314 141 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 RNU4-28P-201ENST00000364739 141 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 RNU6-224P-201ENST00000384055 107 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HNF4AP41235 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.84□□□□□ -1.79
HNF4AP41235 RPL22P18-201ENST00000417197 377 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.84□□□□□ -1.79
HNF4AP41235 AL691449.1-201ENST00000426570 421 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.84□□□□□ -1.79
HNF4AP41235 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.84□□□□□ -1.79
HNF4AP41235 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.84□□□□□ -1.79
HNF4AP41235 OR4C10P-201ENST00000434991 931 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HNF4AP41235 TBCAP1-201ENST00000436520 327 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 MTCO2P20-201ENST00000437339 673 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.84□□□□□ -1.79
HNF4AP41235 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.84□□□□□ -1.79
HNF4AP41235 MTCYBP11-201ENST00000447254 1109 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 MTND2P19-201ENST00000449129 1012 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 RPS11P1-201ENST00000451072 473 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.84□□□□□ -1.79
HNF4AP41235 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.84□□□□□ -1.79
HNF4AP41235 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HNF4AP41235 AL132838.2-201ENST00000492041 314 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.84□□□□□ -1.79
HNF4AP41235 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.84□□□□□ -1.79
HNF4AP41235 AC119751.5-201ENST00000514077 770 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 RN7SKP13-201ENST00000515933 244 ntBASIC3.84□□□□□ -1.79
HNF4AP41235 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.84□□□□□ -1.79
HNF4AP41235 AP001636.2-201ENST00000525517 696 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms