Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC093698.1-201ENST00000423843 571 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AL138799.3-201ENST00000438968 350 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 RPS29P7-201ENST00000439662 171 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD13P35453 CR769776.1-201ENST00000441254 787 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 RPL21P134-201ENST00000453468 483 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXD13P35453 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD13P35453 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD13P35453 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD13P35453 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXD13P35453 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD13P35453 AC093853.1-201ENST00000515689 483 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 MIR2114-201ENST00000516645 80 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD13P35453 HSPA8P13-201ENST00000523715 472 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 OR4P1P-201ENST00000530808 1136 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HOXD13P35453 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD13P35453 EEF1B2P4-201ENST00000551398 348 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 NBEAP1-201ENST00000554452 979 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD13P35453 AL133457.1-201ENST00000564251 987 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 LARP7P2-201ENST00000575306 125 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 SNORD84-203ENST00000584275 78 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AL391001.1-201ENST00000602747 715 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AC055876.5-201ENST00000605667 259 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AC092653.1-201ENST00000608509 531 ntBASIC4.16□□□□□ -1.74
HOXD13P35453 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD13P35453 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD13P35453 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXD13P35453 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD13P35453 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXD13P35453 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HOXD13P35453 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HOXD13P35453 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXD13P35453 LINC00561-201ENST00000565815 2738 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AC004925.1-201ENST00000624256 2706 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AC007685.1-201ENST00000329806 452 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 RNA5SP97-201ENST00000365006 84 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 ATP5F1P4-201ENST00000397288 746 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 RPL7P60-201ENST00000397636 735 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 SNORA3.3-201ENST00000408712 125 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 RPL21P109-201ENST00000422213 475 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 GLRXP1-201ENST00000423261 334 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXD13P35453 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXD13P35453 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 RPL12P26-201ENST00000452430 487 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 MTCO3P11-201ENST00000455103 774 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 RPL31P13-201ENST00000484151 370 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 MTCO3P35-201ENST00000485582 781 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXD13P35453 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AL512347.1-201ENST00000566420 503 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXD13P35453 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 VN1R79P-201ENST00000593540 513 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AC245036.5-201ENST00000596330 847 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 BRDTP1-201ENST00000605735 677 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AC011816.2-201ENST00000607089 556 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 AC131235.4-201ENST00000609288 620 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXD13P35453 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXD13P35453 AP002782.1-201ENST00000623107 614 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXD13P35453 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 AC244517.1-201ENST00000606030 2086 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 OR5BR1P-201ENST00000524992 1330 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
HOXD13P35453 AC116096.1-201ENST00000566804 2314 ntBASIC4.15□□□□□ -1.75
HOXD13P35453 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD13P35453 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HOXD13P35453 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD13P35453 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXD13P35453 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXD13P35453 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD13P35453 U8.11-201ENST00000384699 133 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 U8.12-201ENST00000384701 133 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 U3.29-201ENST00000391296 212 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 RNU6-628P-201ENST00000410675 107 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AMD1P2-201ENST00000412936 992 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXD13P35453 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXD13P35453 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXD13P35453 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HOXD13P35453 RPL26P28-201ENST00000451325 435 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms