Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.96□□□□□ -1.94
USF1P22415 CYP2C60P-201ENST00000566088 139 ntBASIC2.96□□□□□ -1.94
USF1P22415 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.96□□□□□ -1.94
USF1P22415 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.96□□□□□ -1.94
USF1P22415 MIR4425-201ENST00000580572 84 ntBASIC2.96□□□□□ -1.94
USF1P22415 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.96□□□□□ -1.94
USF1P22415 AC011471.1-201ENST00000585766 187 ntBASIC2.96□□□□□ -1.94
USF1P22415 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.96□□□□□ -1.94
USF1P22415 AC006023.2-201ENST00000609916 167 ntBASIC2.96□□□□□ -1.94
USF1P22415 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
USF1P22415 AL163152.1-201ENST00000642001 374 ntBASIC2.96□□□□□ -1.94
USF1P22415 ZNF734P-201ENST00000419494 1534 ntBASIC2.96□□□□□ -1.94
USF1P22415 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
USF1P22415 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USF1P22415 AC116096.1-201ENST00000566804 2314 ntBASIC2.96□□□□□ -1.94
USF1P22415 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 AP001350.1-201ENST00000601906 1524 ntBASIC2.95□□□□□ -1.94
USF1P22415 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.95□□□□□ -1.94
USF1P22415 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 RNU6-374P-201ENST00000364146 108 ntBASIC2.95□□□□□ -1.94
USF1P22415 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 MT-TC-201ENST00000387405 66 ntBASIC2.95□□□□□ -1.94
USF1P22415 RNU6-837P-201ENST00000391056 108 ntBASIC2.95□□□□□ -1.94
USF1P22415 TAF9BP1-201ENST00000396646 746 ntBASIC2.95□□□□□ -1.94
USF1P22415 HSFY4P-201ENST00000415994 1181 ntBASIC2.95□□□□□ -1.94
USF1P22415 TOMM22P1-201ENST00000418578 312 ntBASIC2.95□□□□□ -1.94
USF1P22415 AL009174.1-201ENST00000426577 416 ntBASIC2.95□□□□□ -1.94
USF1P22415 AC096632.1-201ENST00000427395 310 ntBASIC2.95□□□□□ -1.94
USF1P22415 AC114973.1-201ENST00000429057 632 ntBASIC2.95□□□□□ -1.94
USF1P22415 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 HMGB1P12-201ENST00000438594 598 ntBASIC2.95□□□□□ -1.94
USF1P22415 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 ELOCP13-201ENST00000443934 329 ntBASIC2.95□□□□□ -1.94
USF1P22415 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.95□□□□□ -1.94
USF1P22415 snoU13.3-201ENST00000459441 104 ntBASIC2.95□□□□□ -1.94
USF1P22415 AC023598.1-201ENST00000472521 361 ntBASIC2.95□□□□□ -1.94
USF1P22415 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.95□□□□□ -1.94
USF1P22415 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 IGHV3-76-201ENST00000522465 295 ntBASIC2.95□□□□□ -1.94
USF1P22415 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 AP004371.1-201ENST00000525240 214 ntBASIC2.95□□□□□ -1.94
USF1P22415 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 AP000916.1-201ENST00000533869 835 ntBASIC2.95□□□□□ -1.94
USF1P22415 UBE2NP1-201ENST00000545592 458 ntBASIC2.95□□□□□ -1.94
USF1P22415 AC023161.2-201ENST00000551218 780 ntBASIC2.95□□□□□ -1.94
USF1P22415 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.95□□□□□ -1.94
USF1P22415 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.95□□□□□ -1.94
USF1P22415 AC113368.1-201ENST00000603736 382 ntBASIC2.95□□□□□ -1.94
USF1P22415 AL365400.2-201ENST00000605604 902 ntBASIC2.95□□□□□ -1.94
USF1P22415 VN1R9P-201ENST00000614184 867 ntBASIC2.95□□□□□ -1.94
USF1P22415 AL118556.2-201ENST00000614375 824 ntBASIC2.95□□□□□ -1.94
USF1P22415 U4.6-201ENST00000621618 127 ntBASIC2.95□□□□□ -1.94
USF1P22415 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.95□□□□□ -1.94
USF1P22415 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.95□□□□□ -1.94
USF1P22415 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.95□□□□□ -1.94
USF1P22415 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 AL672296.1-201ENST00000427780 2158 ntBASIC2.95□□□□□ -1.94
USF1P22415 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
USF1P22415 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.95□□□□□ -1.94
USF1P22415 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
USF1P22415 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
USF1P22415 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.94□□□□□ -1.94
USF1P22415 AC073055.1-201ENST00000456901 1621 ntBASIC2.94□□□□□ -1.94
USF1P22415 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.94□□□□□ -1.94
USF1P22415 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
USF1P22415 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.94□□□□□ -1.94
USF1P22415 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
USF1P22415 RNU6-283P-201ENST00000364788 107 ntBASIC2.94□□□□□ -1.94
USF1P22415 RNU6-441P-201ENST00000384545 106 ntBASIC2.94□□□□□ -1.94
USF1P22415 RNU2-71P-201ENST00000411395 189 ntBASIC2.94□□□□□ -1.94
USF1P22415 AC096664.2-201ENST00000411843 406 ntBASIC2.94□□□□□ -1.94
USF1P22415 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.94□□□□□ -1.94
USF1P22415 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.94□□□□□ -1.94
USF1P22415 NDUFB1P1-201ENST00000435191 180 ntBASIC2.94□□□□□ -1.94
USF1P22415 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.94□□□□□ -1.94
USF1P22415 AC005002.1-201ENST00000447458 540 ntBASIC2.94□□□□□ -1.94
USF1P22415 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.94□□□□□ -1.94
USF1P22415 Z99714.1-201ENST00000450463 807 ntBASIC2.94□□□□□ -1.94
USF1P22415 RPL7P55-201ENST00000450522 746 ntBASIC2.94□□□□□ -1.94
USF1P22415 RPL21P104-201ENST00000464143 478 ntBASIC2.94□□□□□ -1.94
USF1P22415 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.94□□□□□ -1.94
USF1P22415 CYCSP20-201ENST00000473154 315 ntBASIC2.94□□□□□ -1.94
USF1P22415 HMGB3P15-201ENST00000507326 574 ntBASIC2.94□□□□□ -1.94
USF1P22415 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.94□□□□□ -1.94
USF1P22415 ARL2BPP6-201ENST00000512757 439 ntBASIC2.94□□□□□ -1.94
USF1P22415 RNU6-579P-201ENST00000516879 102 ntBASIC2.94□□□□□ -1.94
USF1P22415 RN7SKP60-201ENST00000516985 239 ntBASIC2.94□□□□□ -1.94
USF1P22415 AP001207.1-201ENST00000524051 481 ntBASIC2.94□□□□□ -1.94
USF1P22415 OR4A45P-201ENST00000529954 901 ntBASIC2.94□□□□□ -1.94
USF1P22415 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.94□□□□□ -1.94
USF1P22415 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms