Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL5A1P20908 AC092628.2-201ENST00000622492 339 ntBASIC2.72□□□□□ -1.97
COL5A1P20908 AC020923.1-201ENST00000624021 917 ntBASIC2.72□□□□□ -1.97
COL5A1P20908 AC241585.2-209ENST00000638217 143 ntBASIC2.72□□□□□ -1.97
COL5A1P20908 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
COL5A1P20908 HSPA8P4-201ENST00000511877 1920 ntBASIC2.72□□□□□ -1.97
COL5A1P20908 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL5A1P20908 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL5A1P20908 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.71□□□□□ -1.98
COL5A1P20908 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL5A1P20908 RNA5SP289-201ENST00000362332 137 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 AL360182.1-201ENST00000397433 468 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 AL138827.1-201ENST00000402666 306 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 DHFRP5-201ENST00000406944 564 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 RNU2-72P-201ENST00000411175 163 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.71□□□□□ -1.98
COL5A1P20908 AC105402.1-201ENST00000413336 545 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.71□□□□□ -1.98
COL5A1P20908 FTH1P6-201ENST00000430768 320 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.71□□□□□ -1.98
COL5A1P20908 RPL23AP23-201ENST00000452590 471 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 AL590639.1-201ENST00000456484 337 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.71□□□□□ -1.98
COL5A1P20908 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.71□□□□□ -1.98
COL5A1P20908 AC025181.1-201ENST00000477507 416 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 SRIP1-201ENST00000489235 288 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.71□□□□□ -1.98
COL5A1P20908 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.71□□□□□ -1.98
COL5A1P20908 AC079089.3-201ENST00000603094 673 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 AC003001.2-201ENST00000616294 831 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 ZNF542P-204ENST00000482727 1305 ntBASIC2.71□□□□□ -1.98
COL5A1P20908 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.71□□□□□ -1.98
COL5A1P20908 MTND5P19-201ENST00000424872 1794 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AL353743.4-201ENST00000422653 1547 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 RNU1-35P-201ENST00000362782 153 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 RPL31P1-201ENST00000398116 372 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.7□□□□□ -1.98
COL5A1P20908 RWDD4P2-201ENST00000426392 563 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.7□□□□□ -1.98
COL5A1P20908 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.7□□□□□ -1.98
COL5A1P20908 ZFAND6P1-201ENST00000434138 605 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC013410.1-201ENST00000436223 1232 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.7□□□□□ -1.98
COL5A1P20908 RPS4XP6-201ENST00000477670 797 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC093278.1-201ENST00000494700 600 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.7□□□□□ -1.98
COL5A1P20908 AC008628.1-201ENST00000508663 265 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 COL6A4P2-205ENST00000509855 506 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.7□□□□□ -1.98
COL5A1P20908 OR8K2P-201ENST00000524645 927 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC019227.1-201ENST00000526902 510 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.7□□□□□ -1.98
COL5A1P20908 SNORA35B-201ENST00000607417 129 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC009032.1-201ENST00000617574 431 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC006111.3-201ENST00000622137 383 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AL138960.2-201ENST00000625145 535 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 HPVC1-201ENST00000629899 1198 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.7□□□□□ -1.98
COL5A1P20908 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.7□□□□□ -1.98
COL5A1P20908 AC022031.1-201ENST00000585985 2593 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
COL5A1P20908 MTCO1P9-201ENST00000505577 1534 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.7□□□□□ -1.98
COL5A1P20908 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.7□□□□□ -1.98
COL5A1P20908 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC068305.1-201ENST00000497406 726 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.7□□□□□ -1.98
COL5A1P20908 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.7□□□□□ -1.98
COL5A1P20908 RNA5SP282-201ENST00000516355 108 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 IGKV3-31-201ENST00000523109 329 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AP002770.2-201ENST00000543613 532 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AC091515.1-201ENST00000548110 679 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.7□□□□□ -1.98
COL5A1P20908 SERPINE4P-201ENST00000554978 281 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 GMCL1P2-201ENST00000605230 823 ntBASIC2.7□□□□□ -1.98
COL5A1P20908 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.69□□□□□ -1.98
COL5A1P20908 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL5A1P20908 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.69□□□□□ -1.98
COL5A1P20908 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.69□□□□□ -1.98
COL5A1P20908 AC090525.1-201ENST00000479116 478 ntBASIC2.69□□□□□ -1.98
COL5A1P20908 AC132942.1-201ENST00000486753 483 ntBASIC2.69□□□□□ -1.98
COL5A1P20908 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
COL5A1P20908 AC021146.5-201ENST00000503544 545 ntBASIC2.69□□□□□ -1.98
COL5A1P20908 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.69□□□□□ -1.98
COL5A1P20908 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.69□□□□□ -1.98
COL5A1P20908 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL5A1P20908 PDCD5P1-201ENST00000543528 309 ntBASIC2.69□□□□□ -1.98
COL5A1P20908 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.69□□□□□ -1.98
COL5A1P20908 DEFB122-202ENST00000569013 197 ntBASIC2.69□□□□□ -1.98
COL5A1P20908 AC092474.3-201ENST00000603022 568 ntBASIC2.69□□□□□ -1.98
COL5A1P20908 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.69□□□□□ -1.98
COL5A1P20908 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
COL5A1P20908 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.69□□□□□ -1.98
COL5A1P20908 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL5A1P20908 RNA5SP68-201ENST00000363885 119 ntBASIC2.68□□□□□ -1.98
COL5A1P20908 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.68□□□□□ -1.98
COL5A1P20908 AL357520.1-201ENST00000441557 453 ntBASIC2.68□□□□□ -1.98
COL5A1P20908 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms