Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB1P09429 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGB1P09429 DUXAP1-201ENST00000556632 463 ntBASIC5.23□□□□□ -1.57
HMGB1P09429 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB1P09429 AC006111.3-201ENST00000622137 383 ntBASIC5.23□□□□□ -1.57
HMGB1P09429 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB1P09429 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB1P09429 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB1P09429 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB1P09429 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB1P09429 CUL1P1-201ENST00000509510 2425 ntBASIC5.23□□□□□ -1.57
HMGB1P09429 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB1P09429 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB1P09429 AC005832.2-201ENST00000538921 1430 ntBASIC5.23□□□□□ -1.57
HMGB1P09429 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
HMGB1P09429 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB1P09429 AC010733.2-201ENST00000589496 5702 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AL353746.1-201ENST00000566293 6881 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
HMGB1P09429 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB1P09429 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB1P09429 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB1P09429 RNU5A-1-201ENST00000362698 116 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 U1.1-201ENST00000384101 164 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AL590704.1-201ENST00000402856 794 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 HMGB3P23-201ENST00000414981 585 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 RPL7AP25-201ENST00000423357 805 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 TMEM167AP1-201ENST00000423409 219 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB1P09429 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.22□□□□□ -1.57
HMGB1P09429 RPL26P6-201ENST00000440913 438 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 ARL2BPP10-201ENST00000446487 531 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 ARPC3P2-201ENST00000457786 533 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AL049714.1-201ENST00000466686 347 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AL049830.2-201ENST00000480072 201 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB1P09429 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 STMN1P2-201ENST00000508435 439 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB1P09429 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB1P09429 AC015795.1-201ENST00000513669 327 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB1P09429 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB1P09429 AL160290.3-201ENST00000604869 165 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB1P09429 RAD17P1-201ENST00000418130 2042 ntBASIC5.22□□□□□ -1.57
HMGB1P09429 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB1P09429 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB1P09429 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB1P09429 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB1P09429 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HMGB1P09429 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
HMGB1P09429 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB1P09429 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB1P09429 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
HMGB1P09429 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGB1P09429 MIR448-201ENST00000362131 111 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 RNU6-1078P-201ENST00000364522 103 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 MIR129-1-201ENST00000384972 72 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 RPS20P14-201ENST00000412545 360 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 RPL27AP8-201ENST00000424277 446 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 ARF4P2-201ENST00000430209 526 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB1P09429 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB1P09429 RPL7P9-201ENST00000468715 747 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 AC007537.2-201ENST00000472093 511 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 AP001025.2-201ENST00000490908 477 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.21□□□□□ -1.58
HMGB1P09429 RNU6-711P-201ENST00000517255 106 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 AC092851.1-201ENST00000535964 478 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB1P09429 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB1P09429 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB1P09429 AC087465.1-201ENST00000560574 245 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB1P09429 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.21□□□□□ -1.58
HMGB1P09429 AC105224.1-201ENST00000587055 421 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.21□□□□□ -1.58
HMGB1P09429 AC004067.1-201ENST00000608733 700 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 AC012409.3-201ENST00000611343 981 ntBASIC5.21□□□□□ -1.58
HMGB1P09429 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB1P09429 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
HMGB1P09429 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HMGB1P09429 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB1P09429 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB1P09429 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
HMGB1P09429 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGB1P09429 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB1P09429 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB1P09429 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB1P09429 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
HMGB1P09429 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
HMGB1P09429 MFSD8-216ENST00000641147 4009 ntBASIC5.2□□□□□ -1.58
HMGB1P09429 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HMGB1P09429 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HMGB1P09429 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB1P09429 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HMGB1P09429 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGB1P09429 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.2□□□□□ -1.58
HMGB1P09429 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms