Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 RPP40P1-201ENST00000426762 456 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC000041.1-201ENST00000439655 175 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 HMGB3P6-201ENST00000444896 598 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC044797.1-201ENST00000445744 679 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 PDSS1P2-201ENST00000449397 678 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 RBMY2UP-201ENST00000453474 324 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 NAP1L1P3-201ENST00000462291 880 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC006499.5-201ENST00000505037 514 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 NAMPTP2-201ENST00000505629 1115 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 RNU6-467P-201ENST00000517027 110 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC124293.1-201ENST00000530034 493 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 RNA5SP108-201ENST00000605921 117 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC084824.5-201ENST00000612009 413 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AL354976.1-201ENST00000613843 387 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC078880.5-201ENST00000617845 421 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC068880.4-201ENST00000623082 495 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPB1P04440 MTND5P28-201ENST00000438005 1594 ntBASIC2.91□□□□□ -1.94
HLA-DPB1P04440 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.9□□□□□ -1.94
HLA-DPB1P04440 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
HLA-DPB1P04440 AC011978.2-201ENST00000569835 2054 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 SNORA63.3-201ENST00000362682 132 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AL355379.1-201ENST00000405542 640 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 HSFY4P-201ENST00000415994 1181 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC008280.1-201ENST00000418851 412 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC005517.2-201ENST00000424673 553 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AP000949.1-201ENST00000438328 629 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AL590399.6-201ENST00000446396 307 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AL050341.1-201ENST00000447743 313 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 CYCSP35-201ENST00000451978 304 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 RN7SL293P-201ENST00000481765 281 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC011352.3-201ENST00000505162 593 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 FCF1P8-201ENST00000510322 597 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 MTCO3P27-201ENST00000514397 196 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 RNU6-488P-201ENST00000515918 99 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC104115.2-201ENST00000523026 687 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 OR4C2P-201ENST00000530855 1064 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 CENPUP2-201ENST00000555897 1186 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 MTND4LP25-201ENST00000570218 163 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 MIR5186-201ENST00000577504 120 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC006270.2-201ENST00000578523 652 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AL365400.2-201ENST00000605604 902 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC092354.2-201ENST00000607786 514 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC112503.1-201ENST00000608436 391 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AC127502.3-201ENST00000636170 1206 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 BX649567.1-201ENST00000642071 1134 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 AL359893.1-201ENST00000447628 1580 ntBASIC2.9□□□□□ -1.95
HLA-DPB1P04440 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
HLA-DPB1P04440 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 MTND5P3-201ENST00000438536 1800 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 RNU6-444P-201ENST00000383988 108 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 RNU6-468P-201ENST00000384003 109 ntBASIC2.89□□□□□ -1.95
HLA-DPB1P04440 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPB1P04440 OR51A3P-201ENST00000413596 924 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms