Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC233728.2-201ENST00000425348 757 ntBASIC2.6□□□□□ -1.99
APOC1P02654 ELOCP11-201ENST00000436690 332 ntBASIC2.6□□□□□ -1.99
APOC1P02654 ELOCP16-201ENST00000444494 332 ntBASIC2.6□□□□□ -1.99
APOC1P02654 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
APOC1P02654 RPS3AP43-201ENST00000479743 781 ntBASIC2.6□□□□□ -1.99
APOC1P02654 AC103975.1-201ENST00000482506 483 ntBASIC2.6□□□□□ -1.99
APOC1P02654 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.6□□□□□ -1.99
APOC1P02654 AL358832.1-201ENST00000497800 389 ntBASIC2.6□□□□□ -1.99
APOC1P02654 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.6□□□□□ -1.99
APOC1P02654 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.6□□□□□ -1.99
APOC1P02654 AC009901.1-201ENST00000506703 541 ntBASIC2.6□□□□□ -1.99
APOC1P02654 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.6□□□□□ -1.99
APOC1P02654 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.6□□□□□ -1.99
APOC1P02654 HMGB1P23-201ENST00000518743 568 ntBASIC2.6□□□□□ -1.99
APOC1P02654 PSMA2P1-201ENST00000526365 646 ntBASIC2.6□□□□□ -1.99
APOC1P02654 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.6□□□□□ -1.99
APOC1P02654 H3F3AP1-201ENST00000559984 334 ntBASIC2.6□□□□□ -1.99
APOC1P02654 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.6□□□□□ -1.99
APOC1P02654 AC006504.3-201ENST00000586818 523 ntBASIC2.6□□□□□ -1.99
APOC1P02654 DUXAP3-201ENST00000603616 594 ntBASIC2.6□□□□□ -1.99
APOC1P02654 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
APOC1P02654 AL162274.2-201ENST00000614406 332 ntBASIC2.6□□□□□ -1.99
APOC1P02654 AC012314.7-201ENST00000619693 93 ntBASIC2.6□□□□□ -1.99
APOC1P02654 AC010809.3-201ENST00000621310 641 ntBASIC2.6□□□□□ -1.99
APOC1P02654 AC002064.3-201ENST00000623448 346 ntBASIC2.6□□□□□ -1.99
APOC1P02654 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.6□□□□□ -1.99
APOC1P02654 AC139713.2-210ENST00000641741 992 ntBASIC2.6□□□□□ -1.99
APOC1P02654 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOC1P02654 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
APOC1P02654 AC138915.1-201ENST00000565427 1685 ntBASIC2.6□□□□□ -1.99
APOC1P02654 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOC1P02654 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.59□□□□□ -1.99
APOC1P02654 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOC1P02654 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.59□□□□□ -1.99
APOC1P02654 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.59□□□□□ -1.99
APOC1P02654 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOC1P02654 AC073325.2-201ENST00000339545 159 ntBASIC2.59□□□□□ -1.99
APOC1P02654 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOC1P02654 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
APOC1P02654 MIR34B-201ENST00000385076 84 ntBASIC2.59□□□□□ -1.99
APOC1P02654 MIR320B1-201ENST00000390209 79 ntBASIC2.59□□□□□ -1.99
APOC1P02654 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.59□□□□□ -1.99
APOC1P02654 RPL6P5-201ENST00000445678 828 ntBASIC2.59□□□□□ -1.99
APOC1P02654 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.59□□□□□ -1.99
APOC1P02654 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.59□□□□□ -1.99
APOC1P02654 AP002404.1-201ENST00000532005 451 ntBASIC2.59□□□□□ -1.99
APOC1P02654 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOC1P02654 CCNG2P1-201ENST00000549521 1000 ntBASIC2.59□□□□□ -1.99
APOC1P02654 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOC1P02654 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.59□□□□□ -1.99
APOC1P02654 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.59□□□□□ -1.99
APOC1P02654 AC015849.6-201ENST00000605454 474 ntBASIC2.59□□□□□ -1.99
APOC1P02654 MIR7112-201ENST00000616126 65 ntBASIC2.59□□□□□ -1.99
APOC1P02654 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.59□□□□□ -1.99
APOC1P02654 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -1.99
APOC1P02654 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.59□□□□□ -2
APOC1P02654 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.58□□□□□ -2
APOC1P02654 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.58□□□□□ -2
APOC1P02654 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
APOC1P02654 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.58□□□□□ -2
APOC1P02654 ARF4P3-201ENST00000397387 509 ntBASIC2.58□□□□□ -2
APOC1P02654 AL356057.2-201ENST00000403318 432 ntBASIC2.58□□□□□ -2
APOC1P02654 GSTA8P-201ENST00000404253 637 ntBASIC2.58□□□□□ -2
APOC1P02654 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
APOC1P02654 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.58□□□□□ -2
APOC1P02654 YME1L1P1-201ENST00000429435 297 ntBASIC2.58□□□□□ -2
APOC1P02654 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.58□□□□□ -2
APOC1P02654 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.58□□□□□ -2
APOC1P02654 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.58□□□□□ -2
APOC1P02654 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.58□□□□□ -2
APOC1P02654 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.58□□□□□ -2
APOC1P02654 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.58□□□□□ -2
APOC1P02654 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
APOC1P02654 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
APOC1P02654 AC074250.1-201ENST00000511117 192 ntBASIC2.58□□□□□ -2
APOC1P02654 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.58□□□□□ -2
APOC1P02654 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.58□□□□□ -2
APOC1P02654 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.58□□□□□ -2
APOC1P02654 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.58□□□□□ -2
APOC1P02654 AL592494.3-201ENST00000609485 464 ntBASIC2.58□□□□□ -2
APOC1P02654 AC090115.4-201ENST00000609970 188 ntBASIC2.58□□□□□ -2
APOC1P02654 MIR6798-201ENST00000612887 67 ntBASIC2.58□□□□□ -2
APOC1P02654 AC140725.3-201ENST00000616193 880 ntBASIC2.58□□□□□ -2
APOC1P02654 AC007318.2-201ENST00000620999 243 ntBASIC2.58□□□□□ -2
APOC1P02654 AC006111.3-201ENST00000622137 383 ntBASIC2.58□□□□□ -2
APOC1P02654 CR392039.4-201ENST00000624968 501 ntBASIC2.58□□□□□ -2
APOC1P02654 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.58□□□□□ -2
APOC1P02654 MTND5P1-201ENST00000445440 1375 ntBASIC2.58□□□□□ -2
APOC1P02654 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOC1P02654 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.57□□□□□ -2
APOC1P02654 AL672167.1-206ENST00000356293 943 ntBASIC2.57□□□□□ -2
APOC1P02654 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.57□□□□□ -2
APOC1P02654 SEPT7P2-202ENST00000398921 823 ntBASIC2.57□□□□□ -2
APOC1P02654 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.57□□□□□ -2
APOC1P02654 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
APOC1P02654 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.57□□□□□ -2
APOC1P02654 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
APOC1P02654 LSM1P1-201ENST00000438629 273 ntBASIC2.57□□□□□ -2
APOC1P02654 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.57□□□□□ -2
APOC1P02654 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms