Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 DHFRP3-201ENST00000455595 559 ntBASIC3.97□□□□□ -1.77
LDLRP01130 MTND4LP3-201ENST00000468320 276 ntBASIC3.97□□□□□ -1.77
LDLRP01130 BNIP3P41-201ENST00000503774 571 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AF213884.2-201ENST00000510417 903 ntBASIC3.97□□□□□ -1.77
LDLRP01130 USP9YP5-201ENST00000511770 630 ntBASIC3.97□□□□□ -1.77
LDLRP01130 FTH1P9-201ENST00000513251 355 ntBASIC3.97□□□□□ -1.77
LDLRP01130 RNU6-1129P-201ENST00000515964 104 ntBASIC3.97□□□□□ -1.77
LDLRP01130 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.97□□□□□ -1.77
LDLRP01130 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 AP003461.1-201ENST00000528866 78 ntBASIC3.97□□□□□ -1.77
LDLRP01130 PDCL2P2-201ENST00000533651 189 ntBASIC3.97□□□□□ -1.77
LDLRP01130 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 AC063950.1-201ENST00000552036 308 ntBASIC3.97□□□□□ -1.77
LDLRP01130 HIGD1AP17-201ENST00000554576 276 ntBASIC3.97□□□□□ -1.77
LDLRP01130 TRAV15-201ENST00000556680 249 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 AC027807.1-201ENST00000559921 996 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.97□□□□□ -1.77
LDLRP01130 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 SNORD39.3-201ENST00000584451 71 ntBASIC3.97□□□□□ -1.77
LDLRP01130 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LDLRP01130 AC113194.1-201ENST00000606037 500 ntBASIC3.97□□□□□ -1.77
LDLRP01130 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LDLRP01130 HULC.1-201ENST00000612720 240 ntBASIC3.97□□□□□ -1.77
LDLRP01130 uc_338.32-201ENST00000615087 172 ntBASIC3.97□□□□□ -1.77
LDLRP01130 MIR6864-201ENST00000617935 70 ntBASIC3.97□□□□□ -1.77
LDLRP01130 uc_338.13-201ENST00000618243 179 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.97□□□□□ -1.77
LDLRP01130 C2orf27A-204ENST00000623058 969 ntBASIC3.97□□□□□ -1.77
LDLRP01130 MKKS-204ENST00000639674 192 ntBASIC3.97□□□□□ -1.77
LDLRP01130 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LDLRP01130 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LDLRP01130 AC106871.1-201ENST00000568324 3102 ntBASIC3.97□□□□□ -1.77
LDLRP01130 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.96□□□□□ -1.77
LDLRP01130 AC107982.1-201ENST00000507171 1300 ntBASIC3.96□□□□□ -1.77
LDLRP01130 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.96□□□□□ -1.77
LDLRP01130 BDP1P-201ENST00000582658 1990 ntBASIC3.96□□□□□ -1.77
LDLRP01130 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
LDLRP01130 AC008725.1-201ENST00000605123 2263 ntBASIC3.96□□□□□ -1.78
LDLRP01130 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
LDLRP01130 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 AC008033.1-201ENST00000216407 1162 ntBASIC3.96□□□□□ -1.78
LDLRP01130 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LDLRP01130 SNORD113-6-201ENST00000363345 75 ntBASIC3.96□□□□□ -1.78
LDLRP01130 RNU6-441P-201ENST00000384545 106 ntBASIC3.96□□□□□ -1.78
LDLRP01130 MIR200C-201ENST00000384980 68 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AL356131.1-201ENST00000405826 414 ntBASIC3.96□□□□□ -1.78
LDLRP01130 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
LDLRP01130 RNU6ATAC-201ENST00000408749 126 ntBASIC3.96□□□□□ -1.78
LDLRP01130 RNU6-757P-201ENST00000410334 100 ntBASIC3.96□□□□□ -1.78
LDLRP01130 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.96□□□□□ -1.78
LDLRP01130 AC004987.3-201ENST00000413879 771 ntBASIC3.96□□□□□ -1.78
LDLRP01130 NUP35P2-201ENST00000416748 943 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AC092832.1-201ENST00000422934 400 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AL139421.1-201ENST00000423010 169 ntBASIC3.96□□□□□ -1.78
LDLRP01130 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.96□□□□□ -1.78
LDLRP01130 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.96□□□□□ -1.78
LDLRP01130 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 AC011742.1-201ENST00000431448 434 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 AL050321.1-201ENST00000432363 400 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.96□□□□□ -1.78
LDLRP01130 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.96□□□□□ -1.78
LDLRP01130 PRSS3P4-201ENST00000453323 162 ntBASIC3.96□□□□□ -1.78
LDLRP01130 RPL5P32-201ENST00000454085 879 ntBASIC3.96□□□□□ -1.78
LDLRP01130 MTND1P16-201ENST00000465177 898 ntBASIC3.96□□□□□ -1.78
LDLRP01130 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 AC092045.1-201ENST00000495716 1231 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AC146944.2-203ENST00000502493 354 ntBASIC3.96□□□□□ -1.78
LDLRP01130 DSTNP2-201ENST00000504533 515 ntBASIC3.96□□□□□ -1.78
LDLRP01130 WBP1LP4-201ENST00000505043 344 ntBASIC3.96□□□□□ -1.78
LDLRP01130 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 AC010625.1-201ENST00000511296 403 ntBASIC3.96□□□□□ -1.78
LDLRP01130 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 NPM1P41-201ENST00000512920 831 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AC139495.1-202ENST00000513164 354 ntBASIC3.96□□□□□ -1.78
LDLRP01130 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.96□□□□□ -1.78
LDLRP01130 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.96□□□□□ -1.78
LDLRP01130 AP000926.4-201ENST00000527351 454 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 AC053481.4-201ENST00000583164 216 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.96□□□□□ -1.78
LDLRP01130 AC004987.4-201ENST00000603383 338 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AC079587.1-201ENST00000603846 277 ntBASIC3.96□□□□□ -1.78
LDLRP01130 MIR6875-201ENST00000617506 72 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AL713922.2-201ENST00000619384 716 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AC244100.1-202ENST00000621554 382 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 372.9 ms