Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
USH2AO75445 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 Y_RNA.205-201ENST00000364128 113 ntBASIC1.17□□□□□ -2.22
USH2AO75445 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
USH2AO75445 FO393414.1-201ENST00000428697 1184 ntBASIC1.17□□□□□ -2.22
USH2AO75445 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.17□□□□□ -2.22
USH2AO75445 AC010401.1-201ENST00000463867 348 ntBASIC1.17□□□□□ -2.22
USH2AO75445 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC1.17□□□□□ -2.22
USH2AO75445 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.17□□□□□ -2.22
USH2AO75445 AC010620.2-201ENST00000600135 313 ntBASIC1.17□□□□□ -2.22
USH2AO75445 MIR4727-201ENST00000622232 55 ntBASIC1.17□□□□□ -2.22
USH2AO75445 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
USH2AO75445 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC1.17□□□□□ -2.22
USH2AO75445 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
USH2AO75445 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
USH2AO75445 RNU6-392P-201ENST00000364926 101 ntBASIC1.17□□□□□ -2.22
USH2AO75445 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
USH2AO75445 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.17□□□□□ -2.22
USH2AO75445 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.17□□□□□ -2.22
USH2AO75445 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC1.17□□□□□ -2.22
USH2AO75445 AC091903.1-201ENST00000624322 454 ntBASIC1.17□□□□□ -2.22
USH2AO75445 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 RN7SKP199-201ENST00000410325 305 ntBASIC1.17□□□□□ -2.22
USH2AO75445 RNA5SP38-201ENST00000410750 119 ntBASIC1.17□□□□□ -2.22
USH2AO75445 AC006989.1-201ENST00000427212 131 ntBASIC1.17□□□□□ -2.22
USH2AO75445 CR769767.1-201ENST00000436337 346 ntBASIC1.17□□□□□ -2.22
USH2AO75445 OR6K1P-201ENST00000456766 971 ntBASIC1.17□□□□□ -2.22
USH2AO75445 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC1.17□□□□□ -2.22
USH2AO75445 AC068587.2-201ENST00000478386 781 ntBASIC1.17□□□□□ -2.22
USH2AO75445 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.17□□□□□ -2.22
USH2AO75445 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.16□□□□□ -2.22
USH2AO75445 EI24P2-201ENST00000397776 1076 ntBASIC1.16□□□□□ -2.22
USH2AO75445 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC1.16□□□□□ -2.22
USH2AO75445 PTP4A1P7-201ENST00000423476 514 ntBASIC1.16□□□□□ -2.22
USH2AO75445 SEPT14P1-201ENST00000458703 648 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AC080013.2-201ENST00000460866 323 ntBASIC1.16□□□□□ -2.22
USH2AO75445 HMGB1P25-201ENST00000468402 607 ntBASIC1.16□□□□□ -2.22
USH2AO75445 CYCSP20-201ENST00000473154 315 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AP001086.1-201ENST00000494882 321 ntBASIC1.16□□□□□ -2.22
USH2AO75445 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 AC011494.1-201ENST00000596454 237 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 MIR625-201ENST00000385047 85 ntBASIC1.16□□□□□ -2.22
USH2AO75445 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 LUZP4P1-201ENST00000415420 344 ntBASIC1.16□□□□□ -2.22
USH2AO75445 Z82205.1-201ENST00000428456 297 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC1.16□□□□□ -2.22
USH2AO75445 HAR1A.1-201ENST00000459583 118 ntBASIC1.16□□□□□ -2.22
USH2AO75445 RPL23AP42-201ENST00000471152 471 ntBASIC1.16□□□□□ -2.22
USH2AO75445 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.16□□□□□ -2.22
USH2AO75445 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 AC128657.1-201ENST00000549459 145 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AC007424.1-203ENST00000554613 687 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AL391156.1-201ENST00000554965 554 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 AC011460.1-201ENST00000636268 1834 ntBASIC1.16□□□□□ -2.22
USH2AO75445 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
USH2AO75445 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 TCP1P3-201ENST00000414406 1498 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 ST13P20-201ENST00000447996 1065 ntBASIC1.16□□□□□ -2.22
USH2AO75445 TVP23BP2-201ENST00000455082 615 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.16□□□□□ -2.22
USH2AO75445 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.16□□□□□ -2.22
USH2AO75445 AC135279.1-201ENST00000543493 504 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 AC002064.3-201ENST00000623448 346 ntBASIC1.16□□□□□ -2.22
USH2AO75445 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.16□□□□□ -2.22
USH2AO75445 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.16□□□□□ -2.22
USH2AO75445 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 AC018634.1-201ENST00000437554 401 ntBASIC1.16□□□□□ -2.22
USH2AO75445 CACYBPP2-201ENST00000453625 678 ntBASIC1.16□□□□□ -2.22
USH2AO75445 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms