Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC087879.1-201ENST00000474343 374 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.32□□□□□ -1.88
HCN1O60741 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.32□□□□□ -1.88
HCN1O60741 AC091860.1-201ENST00000505723 432 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AC119751.1-201ENST00000513357 765 ntBASIC3.32□□□□□ -1.88
HCN1O60741 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.32□□□□□ -1.88
HCN1O60741 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
HCN1O60741 RN7SKP289-201ENST00000517244 295 ntBASIC3.32□□□□□ -1.88
HCN1O60741 RPL12P22-201ENST00000519073 490 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.32□□□□□ -1.88
HCN1O60741 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.32□□□□□ -1.88
HCN1O60741 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.32□□□□□ -1.88
HCN1O60741 CCNG2P1-201ENST00000549521 1000 ntBASIC3.32□□□□□ -1.88
HCN1O60741 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.32□□□□□ -1.88
HCN1O60741 AC104072.1-201ENST00000568817 668 ntBASIC3.32□□□□□ -1.88
HCN1O60741 TMF1P1-201ENST00000576058 373 ntBASIC3.32□□□□□ -1.88
HCN1O60741 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.32□□□□□ -1.88
HCN1O60741 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AC015967.1-201ENST00000619893 476 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AL732618.1-201ENST00000623251 301 ntBASIC3.32□□□□□ -1.88
HCN1O60741 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
HCN1O60741 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 ZNF542P-204ENST00000482727 1305 ntBASIC3.32□□□□□ -1.88
HCN1O60741 MTND4P34-201ENST00000572715 1371 ntBASIC3.32□□□□□ -1.88
HCN1O60741 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HCN1O60741 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCN1O60741 ZNF826P-207ENST00000622273 1910 ntBASIC3.32□□□□□ -1.88
HCN1O60741 AL049781.1-201ENST00000623195 3585 ntBASIC3.31□□□□□ -1.88
HCN1O60741 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.31□□□□□ -1.88
HCN1O60741 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 PABPC1P7-201ENST00000413177 1513 ntBASIC3.31□□□□□ -1.88
HCN1O60741 ELL2P4-201ENST00000446870 1376 ntBASIC3.31□□□□□ -1.88
HCN1O60741 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.31□□□□□ -1.88
HCN1O60741 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
HCN1O60741 RNU6-619P-201ENST00000365146 108 ntBASIC3.31□□□□□ -1.88
HCN1O60741 RNA5SP235-201ENST00000365411 114 ntBASIC3.31□□□□□ -1.88
HCN1O60741 RNU6-444P-201ENST00000383988 108 ntBASIC3.31□□□□□ -1.88
HCN1O60741 SOD2P1-201ENST00000396543 562 ntBASIC3.31□□□□□ -1.88
HCN1O60741 RPL7P60-201ENST00000397636 735 ntBASIC3.31□□□□□ -1.88
HCN1O60741 AL603865.2-201ENST00000401679 213 ntBASIC3.31□□□□□ -1.88
HCN1O60741 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.31□□□□□ -1.88
HCN1O60741 AC073264.1-201ENST00000411508 416 ntBASIC3.31□□□□□ -1.88
HCN1O60741 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN1O60741 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN1O60741 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 CYCSP4-201ENST00000429682 331 ntBASIC3.31□□□□□ -1.88
HCN1O60741 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
HCN1O60741 RPL7P59-201ENST00000447700 943 ntBASIC3.31□□□□□ -1.88
HCN1O60741 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.31□□□□□ -1.88
HCN1O60741 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
HCN1O60741 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN1O60741 AC010198.2-201ENST00000550612 259 ntBASIC3.31□□□□□ -1.88
HCN1O60741 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN1O60741 ZNF971P-201ENST00000562068 1249 ntBASIC3.31□□□□□ -1.88
HCN1O60741 AC008507.2-201ENST00000588402 1176 ntBASIC3.31□□□□□ -1.88
HCN1O60741 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.31□□□□□ -1.88
HCN1O60741 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 AC068620.3-201ENST00000602749 560 ntBASIC3.31□□□□□ -1.88
HCN1O60741 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 AC099785.1-201ENST00000605697 437 ntBASIC3.31□□□□□ -1.88
HCN1O60741 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.31□□□□□ -1.88
HCN1O60741 AC243312.2-201ENST00000623340 601 ntBASIC3.31□□□□□ -1.88
HCN1O60741 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 AC106858.1-201ENST00000637497 429 ntBASIC3.31□□□□□ -1.88
HCN1O60741 AC244258.1-201ENST00000637553 1071 ntBASIC3.31□□□□□ -1.88
HCN1O60741 AC139713.2-210ENST00000641741 992 ntBASIC3.31□□□□□ -1.88
HCN1O60741 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN1O60741 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
HCN1O60741 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN1O60741 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HCN1O60741 AP001350.1-201ENST00000601906 1524 ntBASIC3.3□□□□□ -1.88
HCN1O60741 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.3□□□□□ -1.88
HCN1O60741 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HCN1O60741 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HCN1O60741 SNORD46.1-201ENST00000364139 104 ntBASIC3.3□□□□□ -1.88
HCN1O60741 RNA5SP42-201ENST00000364278 115 ntBASIC3.3□□□□□ -1.88
HCN1O60741 SNORA70.4-201ENST00000365509 134 ntBASIC3.3□□□□□ -1.88
HCN1O60741 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN1O60741 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
HCN1O60741 RNU6-549P-201ENST00000384433 107 ntBASIC3.3□□□□□ -1.88
HCN1O60741 RNU6-575P-201ENST00000411326 105 ntBASIC3.3□□□□□ -1.88
HCN1O60741 MTND4P22-201ENST00000413116 1169 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms