Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC093698.1-201ENST00000423843 571 ntBASIC3.71□□□□□ -1.82
PRKNO60260 SDCBPP2-201ENST00000424643 885 ntBASIC3.71□□□□□ -1.82
PRKNO60260 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKNO60260 AC244035.1-201ENST00000430042 390 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKNO60260 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKNO60260 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 RPS29P7-201ENST00000439662 171 ntBASIC3.71□□□□□ -1.82
PRKNO60260 MTCO1P48-201ENST00000448024 1096 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKNO60260 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKNO60260 ZNF114P1-201ENST00000453500 292 ntBASIC3.71□□□□□ -1.82
PRKNO60260 ARPC3P2-201ENST00000457786 533 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC010301.1-201ENST00000473936 355 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC068724.1-201ENST00000487100 792 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 AC110792.1-201ENST00000491826 472 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKNO60260 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PRKNO60260 Y_RNA.655-201ENST00000515919 96 ntBASIC3.71□□□□□ -1.82
PRKNO60260 RNA5SP179-201ENST00000517284 121 ntBASIC3.71□□□□□ -1.82
PRKNO60260 RPL12P22-201ENST00000519073 490 ntBASIC3.71□□□□□ -1.82
PRKNO60260 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRKNO60260 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKNO60260 AGGF1P8-201ENST00000562979 1000 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC120057.2-201ENST00000571520 271 ntBASIC3.71□□□□□ -1.82
PRKNO60260 ROCK1P1-201ENST00000573767 549 ntBASIC3.71□□□□□ -1.82
PRKNO60260 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.71□□□□□ -1.82
PRKNO60260 AC053481.4-201ENST00000583164 216 ntBASIC3.71□□□□□ -1.82
PRKNO60260 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 AC091167.4-201ENST00000605079 184 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AL109618.2-201ENST00000605527 211 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC079228.1-201ENST00000624774 1049 ntBASIC3.71□□□□□ -1.82
PRKNO60260 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 AC127502.3-201ENST00000636170 1206 ntBASIC3.71□□□□□ -1.82
PRKNO60260 MIR6715B-201ENST00000637172 77 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AC099063.3-201ENST00000642066 185 ntBASIC3.71□□□□□ -1.82
PRKNO60260 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PRKNO60260 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKNO60260 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRKNO60260 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKNO60260 AC011266.1-201ENST00000624119 3569 ntBASIC3.71□□□□□ -1.82
PRKNO60260 AL139811.1-201ENST00000424779 2299 ntBASIC3.7□□□□□ -1.82
PRKNO60260 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKNO60260 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKNO60260 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PRKNO60260 RPL21P132-201ENST00000331267 462 ntBASIC3.7□□□□□ -1.82
PRKNO60260 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKNO60260 RNU4-24P-201ENST00000364565 139 ntBASIC3.7□□□□□ -1.82
PRKNO60260 RNU6-660P-201ENST00000364566 109 ntBASIC3.7□□□□□ -1.82
PRKNO60260 Y_RNA.302-201ENST00000364997 102 ntBASIC3.7□□□□□ -1.82
PRKNO60260 RNU6-1279P-201ENST00000383917 103 ntBASIC3.7□□□□□ -1.82
PRKNO60260 RNU6-441P-201ENST00000384545 106 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKNO60260 MTCYBP38-201ENST00000417160 1123 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 RPL17P36-201ENST00000420302 549 ntBASIC3.7□□□□□ -1.82
PRKNO60260 RWDD4P2-201ENST00000426392 563 ntBASIC3.7□□□□□ -1.82
PRKNO60260 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AL589823.1-201ENST00000429577 183 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC092427.1-201ENST00000439177 601 ntBASIC3.7□□□□□ -1.82
PRKNO60260 MTND1P30-201ENST00000441241 901 ntBASIC3.7□□□□□ -1.82
PRKNO60260 TAF9P1-201ENST00000445421 515 ntBASIC3.7□□□□□ -1.82
PRKNO60260 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKNO60260 AL121877.1-201ENST00000453704 622 ntBASIC3.7□□□□□ -1.82
PRKNO60260 TAF9P2-201ENST00000454958 515 ntBASIC3.7□□□□□ -1.82
PRKNO60260 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKNO60260 AC092757.1-201ENST00000467293 467 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC010683.1-201ENST00000473673 378 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 AL024509.2-201ENST00000493462 493 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 KLRA1P-201ENST00000503499 986 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC010460.1-201ENST00000507087 466 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 RNU6-352P-201ENST00000516908 107 ntBASIC3.7□□□□□ -1.82
PRKNO60260 IGKV2-38-201ENST00000517443 247 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKNO60260 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKNO60260 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.7□□□□□ -1.82
PRKNO60260 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKNO60260 DEFB109D-201ENST00000529497 240 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.7□□□□□ -1.82
PRKNO60260 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.7□□□□□ -1.82
PRKNO60260 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKNO60260 AC007115.1-201ENST00000546853 234 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms