Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPL7P50-201ENST00000600588 727 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.53□□□□□ -1.68
PHGDHO43175 AL512782.1-201ENST00000603093 364 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AC080078.2-201ENST00000603766 501 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 NDUFA8P1-201ENST00000605525 367 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AL589743.7-201ENST00000612637 233 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AC008498.1-201ENST00000613012 531 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.53□□□□□ -1.68
PHGDHO43175 MIR6853-201ENST00000619642 74 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.53□□□□□ -1.68
PHGDHO43175 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.53□□□□□ -1.68
PHGDHO43175 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PHGDHO43175 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
PHGDHO43175 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 AC092125.1-201ENST00000562568 1995 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHGDHO43175 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PHGDHO43175 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PHGDHO43175 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHGDHO43175 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHGDHO43175 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PHGDHO43175 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHGDHO43175 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PHGDHO43175 AL590240.1-201ENST00000334118 313 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AL645927.1-201ENST00000396783 406 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 RN7SKP247-201ENST00000411094 308 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 RN7SKP100-201ENST00000411258 284 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.52□□□□□ -1.69
PHGDHO43175 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 EZH2P1-201ENST00000431167 291 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC016831.4-201ENST00000438302 307 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.52□□□□□ -1.69
PHGDHO43175 AL031667.1-201ENST00000440222 725 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AL353691.1-201ENST00000451332 387 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.52□□□□□ -1.69
PHGDHO43175 SCARNA10-201ENST00000459255 330 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 KLF3P2-201ENST00000465138 268 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC004453.1-201ENST00000487895 408 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC011005.3-201ENST00000491624 395 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC108022.1-201ENST00000493466 478 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 NDUFB4P2-201ENST00000509515 391 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 RN7SKP298-201ENST00000515950 94 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.52□□□□□ -1.69
PHGDHO43175 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.52□□□□□ -1.69
PHGDHO43175 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.52□□□□□ -1.69
PHGDHO43175 AC245505.1-201ENST00000556398 224 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 HMGB3P26-201ENST00000560051 582 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 AC137800.2-201ENST00000574375 120 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC009977.1-201ENST00000586015 570 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.52□□□□□ -1.69
PHGDHO43175 AC073648.5-201ENST00000603502 305 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AL359999.1-201ENST00000604513 294 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.52□□□□□ -1.69
PHGDHO43175 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC091905.2-201ENST00000623143 306 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 U3.53-201ENST00000628922 216 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 BMS1P21-201ENST00000634565 365 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC092447.7-201ENST00000422212 1621 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC010928.1-201ENST00000592477 1447 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 AC015813.6-201ENST00000624409 5808 ntBASIC4.52□□□□□ -1.69
PHGDHO43175 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PHGDHO43175 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.52□□□□□ -1.69
PHGDHO43175 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHGDHO43175 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PHGDHO43175 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PHGDHO43175 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PHGDHO43175 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
PHGDHO43175 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PHGDHO43175 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.51□□□□□ -1.69
PHGDHO43175 RNU1-63P-201ENST00000383902 164 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AL109941.1-201ENST00000401925 229 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AL645733.1-201ENST00000402250 217 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 Z98745.1-201ENST00000402553 494 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 RNU2-66P-201ENST00000410650 161 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AL359704.1-201ENST00000411586 781 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 BX510359.2-201ENST00000417920 305 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AL391219.1-201ENST00000422570 483 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.51□□□□□ -1.69
PHGDHO43175 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 AC244505.5-201ENST00000443639 207 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.51□□□□□ -1.69
PHGDHO43175 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.51□□□□□ -1.69
PHGDHO43175 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms