Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM1O15116 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LSM1O15116 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM1O15116 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM1O15116 RNU6-792P-201ENST00000363490 107 ntBASIC3.27□□□□□ -1.89
LSM1O15116 RNU6-263P-201ENST00000363811 107 ntBASIC3.27□□□□□ -1.89
LSM1O15116 RNA5SP515-201ENST00000364570 118 ntBASIC3.27□□□□□ -1.89
LSM1O15116 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
LSM1O15116 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
LSM1O15116 RNU6-837P-201ENST00000391056 108 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AL158050.1-201ENST00000416077 457 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AL357078.2-201ENST00000416486 427 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 AC073508.1-201ENST00000428866 656 ntBASIC3.27□□□□□ -1.89
LSM1O15116 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM1O15116 AC073387.1-201ENST00000453261 709 ntBASIC3.27□□□□□ -1.89
LSM1O15116 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
LSM1O15116 PRDX3P4-201ENST00000470828 747 ntBASIC3.27□□□□□ -1.89
LSM1O15116 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM1O15116 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 RN7SKP18-201ENST00000516005 275 ntBASIC3.27□□□□□ -1.89
LSM1O15116 SNORA31.20-201ENST00000517111 133 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 AP003385.6-201ENST00000531603 374 ntBASIC3.27□□□□□ -1.89
LSM1O15116 OR8K4P-201ENST00000534608 872 ntBASIC3.27□□□□□ -1.89
LSM1O15116 GTF2IP22-201ENST00000554443 182 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM1O15116 ZNF92P2-201ENST00000600543 1059 ntBASIC3.27□□□□□ -1.89
LSM1O15116 VN1R85P-201ENST00000601587 426 ntBASIC3.27□□□□□ -1.89
LSM1O15116 HSPE1P14-201ENST00000605812 302 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AC012467.1-201ENST00000607740 256 ntBASIC3.27□□□□□ -1.89
LSM1O15116 MIR6810-201ENST00000622701 70 ntBASIC3.27□□□□□ -1.89
LSM1O15116 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM1O15116 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM1O15116 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.27□□□□□ -1.89
LSM1O15116 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM1O15116 AC004925.1-201ENST00000624256 2706 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AL645937.1-201ENST00000641739 1652 ntBASIC3.27□□□□□ -1.89
LSM1O15116 AC073055.1-201ENST00000456901 1621 ntBASIC3.26□□□□□ -1.89
LSM1O15116 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM1O15116 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM1O15116 RNU6-989P-201ENST00000362756 107 ntBASIC3.26□□□□□ -1.89
LSM1O15116 RNU6-921P-201ENST00000384361 107 ntBASIC3.26□□□□□ -1.89
LSM1O15116 Y_RNA.493-201ENST00000384422 102 ntBASIC3.26□□□□□ -1.89
LSM1O15116 RN7SKP111-201ENST00000410349 271 ntBASIC3.26□□□□□ -1.89
LSM1O15116 RPL21P40-201ENST00000428586 483 ntBASIC3.26□□□□□ -1.89
LSM1O15116 ATP5JP1-201ENST00000431631 322 ntBASIC3.26□□□□□ -1.89
LSM1O15116 PTP4A1P3-201ENST00000433661 420 ntBASIC3.26□□□□□ -1.89
LSM1O15116 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM1O15116 RPL17P49-201ENST00000443728 411 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AL500527.1-201ENST00000448532 255 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AC010285.1-201ENST00000470580 392 ntBASIC3.26□□□□□ -1.89
LSM1O15116 HMGN2P13-201ENST00000476476 274 ntBASIC3.26□□□□□ -1.89
LSM1O15116 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM1O15116 RNU6-1102P-201ENST00000516149 96 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AP000916.1-201ENST00000533869 835 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM1O15116 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM1O15116 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM1O15116 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM1O15116 AC079791.1-201ENST00000605356 973 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AL627309.6-201ENST00000606857 840 ntBASIC3.26□□□□□ -1.89
LSM1O15116 MIR7851-201ENST00000610611 160 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AC024941.1-201ENST00000612250 334 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AL390240.1-201ENST00000612950 384 ntBASIC3.26□□□□□ -1.89
LSM1O15116 AC073348.1-201ENST00000623002 331 ntBASIC3.26□□□□□ -1.89
LSM1O15116 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.26□□□□□ -1.89
LSM1O15116 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM1O15116 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM1O15116 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM1O15116 AL356274.2-201ENST00000624379 3752 ntBASIC3.26□□□□□ -1.89
LSM1O15116 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM1O15116 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LSM1O15116 AC093908.1-201ENST00000623125 8092 ntBASIC3.25□□□□□ -1.89
LSM1O15116 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM1O15116 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LSM1O15116 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM1O15116 RNU6-50P-201ENST00000362356 103 ntBASIC3.25□□□□□ -1.89
LSM1O15116 RNA5SP197-201ENST00000363357 119 ntBASIC3.25□□□□□ -1.89
LSM1O15116 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM1O15116 RNU6-730P-201ENST00000383954 104 ntBASIC3.25□□□□□ -1.89
LSM1O15116 SNORA57.1-201ENST00000391227 145 ntBASIC3.25□□□□□ -1.89
LSM1O15116 SNORA26.7-201ENST00000391288 122 ntBASIC3.25□□□□□ -1.89
LSM1O15116 RPL31P1-201ENST00000398116 372 ntBASIC3.25□□□□□ -1.89
LSM1O15116 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM1O15116 RNU4-27P-201ENST00000410889 139 ntBASIC3.25□□□□□ -1.89
LSM1O15116 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.25□□□□□ -1.89
LSM1O15116 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
LSM1O15116 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM1O15116 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM1O15116 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM1O15116 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms