Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RPL7P59-201ENST00000447700 943 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.89□□□□□ -1.95
UPK1AO00322 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC126121.1-201ENST00000482313 553 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 RPL7P23-201ENST00000493874 747 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 AL358832.1-201ENST00000497800 389 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 AC078918.1-201ENST00000498515 228 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
UPK1AO00322 AC005921.1-201ENST00000510589 286 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.89□□□□□ -1.95
UPK1AO00322 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC010198.2-201ENST00000550612 259 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC069234.5-201ENST00000611056 416 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.89□□□□□ -1.95
UPK1AO00322 AC099506.2-201ENST00000623074 221 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 AC083865.1-201ENST00000636634 831 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
UPK1AO00322 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
UPK1AO00322 MTCO1P24-201ENST00000515438 1558 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.88□□□□□ -1.95
UPK1AO00322 GABRG2-229ENST00000641017 3628 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.88□□□□□ -1.95
UPK1AO00322 SNORA63.1-201ENST00000362493 131 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 EIF5P1-201ENST00000400019 1231 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 CR848007.2-201ENST00000424918 787 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.88□□□□□ -1.95
UPK1AO00322 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
UPK1AO00322 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.88□□□□□ -1.95
UPK1AO00322 RPS27P5-201ENST00000444247 244 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC068135.1-201ENST00000446164 246 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC016696.1-201ENST00000446949 318 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.88□□□□□ -1.95
UPK1AO00322 MTND5P8-201ENST00000449817 1083 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 RN7SL807P-201ENST00000470923 297 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 RPL7P5-201ENST00000471472 736 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC108860.1-201ENST00000484521 383 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 NCOR1P1-202ENST00000486162 291 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.88□□□□□ -1.95
UPK1AO00322 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.88□□□□□ -1.95
UPK1AO00322 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.88□□□□□ -1.95
UPK1AO00322 CKS1BP1-201ENST00000555221 240 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.88□□□□□ -1.95
UPK1AO00322 AC005951.1-201ENST00000576706 485 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.88□□□□□ -1.95
UPK1AO00322 AC010928.3-201ENST00000587712 541 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC083760.1-201ENST00000589621 670 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.88□□□□□ -1.95
UPK1AO00322 AC125494.3-201ENST00000602759 455 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.88□□□□□ -1.95
UPK1AO00322 YWHAQP7-201ENST00000603536 658 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
UPK1AO00322 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.88□□□□□ -1.95
UPK1AO00322 AC024595.1-201ENST00000623088 387 ntBASIC2.88□□□□□ -1.95
UPK1AO00322 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.88□□□□□ -1.95
UPK1AO00322 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
UPK1AO00322 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
UPK1AO00322 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
UPK1AO00322 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.88□□□□□ -1.95
UPK1AO00322 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
UPK1AO00322 AC093908.1-201ENST00000623125 8092 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1AO00322 AL672296.1-201ENST00000427780 2158 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.87□□□□□ -1.95
UPK1AO00322 AL512646.1-201ENST00000269395 1077 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1AO00322 SNORA51.12-201ENST00000384448 134 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 SNORD67-201ENST00000390833 111 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 HSPE1P26-201ENST00000405341 275 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 MIR1250-201ENST00000408098 113 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 BMS1P22-201ENST00000414726 313 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.87□□□□□ -1.95
UPK1AO00322 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
UPK1AO00322 PTP4A1P3-201ENST00000433661 420 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AC007000.2-201ENST00000442564 487 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 Z77249.1-201ENST00000444622 1175 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 RPL23AP15-201ENST00000450202 459 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AC233982.1-201ENST00000451247 436 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1AO00322 MRPL35P4-201ENST00000453682 566 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AC092754.2-201ENST00000463506 460 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 RPL7P49-201ENST00000471402 708 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 RPS26P21-201ENST00000475397 348 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 RN7SL504P-201ENST00000494496 287 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1AO00322 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1AO00322 AC008565.1-201ENST00000509046 885 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1AO00322 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms