Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC040168.1-201ENST00000623594 991 ntBASIC3.84□□□□□ -1.79
CCDC188H7C350 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC188H7C350 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC188H7C350 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC188H7C350 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC188H7C350 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC188H7C350 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.84□□□□□ -1.8
CCDC188H7C350 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC188H7C350 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC188H7C350 NUP58P1-201ENST00000502546 1738 ntBASIC3.84□□□□□ -1.8
CCDC188H7C350 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC188H7C350 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 RNU6-1249P-201ENST00000363237 111 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 U1.1-201ENST00000384101 164 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 MIR506-201ENST00000384998 124 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AL138880.1-201ENST00000405824 642 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 LUZP4P1-201ENST00000415420 344 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC188H7C350 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 BMS1P19-201ENST00000433925 393 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC188H7C350 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC188H7C350 MRPS31P2-201ENST00000451581 518 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AC006539.3-201ENST00000454258 129 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 ANP32BP2-201ENST00000454525 545 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC188H7C350 snoU13.3-201ENST00000459441 104 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC188H7C350 AC005921.1-201ENST00000510589 286 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 RNU6-579P-201ENST00000516879 102 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 IGKV2D-23-201ENST00000518179 286 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AP006245.1-201ENST00000522549 120 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC188H7C350 AC125611.1-201ENST00000549563 229 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AL389895.1-201ENST00000554127 252 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 MTND1P8-201ENST00000571424 950 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC188H7C350 AC006270.2-201ENST00000578523 652 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AP001269.3-201ENST00000588718 329 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 BNIP3P24-201ENST00000593398 557 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AC018755.4-201ENST00000619715 454 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AC073348.1-201ENST00000623002 331 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AC068787.1-201ENST00000623908 691 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 U6.101-201ENST00000637707 76 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 MTCO1P23-201ENST00000415223 1526 ntBASIC3.83□□□□□ -1.8
CCDC188H7C350 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC188H7C350 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CCDC188H7C350 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC188H7C350 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 RNU6-216P-201ENST00000363282 104 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 SNORA7.2-201ENST00000364446 145 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC188H7C350 RNU6-730P-201ENST00000383954 104 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 Y_RNA.465-201ENST00000384293 102 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 OR6C69P-201ENST00000394268 893 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 RNU6-55P-201ENST00000411092 107 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 RNU6-954P-201ENST00000411355 107 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC188H7C350 GLRXP1-201ENST00000423261 334 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC188H7C350 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC188H7C350 RRM2P4-201ENST00000441721 562 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 ELOCP13-201ENST00000443934 329 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC188H7C350 MTCO2P25-201ENST00000447065 681 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 PTENP1-201ENST00000447117 1215 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC188H7C350 RPL39P6-201ENST00000448289 150 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 OFD1P3Y-201ENST00000453312 783 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 AC007537.2-201ENST00000472093 511 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AC008837.2-201ENST00000513076 418 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 RNU6-415P-201ENST00000516252 97 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AP001636.2-201ENST00000525517 696 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC188H7C350 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AC008011.1-201ENST00000545989 227 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC188H7C350 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC188H7C350 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC188H7C350 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CCDC188H7C350 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC188H7C350 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC188H7C350 BNIP3P38-201ENST00000601117 544 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms